000-51863 (Commission File No.) |
03-0491827 (IRS Employer Identification No.) |
(d) | Exhibits |
Exhibit No. | Description | |
99.1
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Presentation posters. | |
99.2
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Press Release of Vanda Pharmaceuticals Inc. dated May 14, 2009. |
Table 1. Similar Molecular Signature of Antipsychotics and Selective Estrogen Receptor Modulators Figure 4. Effect of Antipsychotics on the Biosynthesis of Fatty Acids and Cholesterol Figure 3. Expression Changes by Selective Estrogen Receptor Modulators of Top Ranked Probe Sets of the Antipsychotic Group Profile Figure 1. Profiled Antipsychotics and Selective Estrogen Receptor Modulators A b s t r a c t I n t r o d u c t I o n NR1-092 Objective: A possible protective effect of estrogen has been proposed for schizophrenia based on the observation that, relative to men, women show a delay in disease onset age with a second onset peak after age 44 years. Recently, DNA variants which may contribute to the risk of developing schizophrenia have been identified in the estrogen receptor alpha gene. Several clinical studies have shown that the selective estrogen receptor modulator (SERM) tamoxifen can reduce mania symptoms in patients with bipolar disorder. Symptoms of psychosis and cognitive functioning were also shown to improve in women affected with schizophrenia who were treated with oestradiol or raloxifene. To better understand the effect of SERMs at the molecular level, their impact on the expression of the human genome was evaluated. Methods: The gene expression group profile of tamoxifen, raloxifen and clomiphene was determined in a cell line by analyzing the up- and down-regulation of 12,490 genes. Truncated Kolmogorov-Smirnov (KS) statistics were used to compare the SERM gene signature with that of a library of 463 drugs used to treat a variety of disorders. Results: It was discovered that the gene expression signature of the SERMs was the most similar to that of the antipsychotics, as compared to all other drug group profiles. SERMs affect lipid homeostasis in a manner similar to antipsychotics (KS scores of 0.997 and 0.806 for the top 20 and 100 probe sets, respectively). A number of genes up-regulated by both SERMs and antipsychotics were Sterol Regulatory Element Binding Proteins (SREBP) responsive genes in the cholesterol biosynthetic pathway, which have been shown to be activated by the modulation of the estrogen receptor. Conclusions: These results support an antipsychotic therapeutic effect of SERMs, possibly through the alteration of lipid homeostasis. Vanda Pharmaceuticals sponsored this study. We have identified a common effect of antipsychotics (both typical and atypicals) on the biosynthesis and regulation of fatty acids and cholesterol: 19 of the first 20 (95%) ranked probe sets in the antipsychotic group profile correspond to 13 genes involved in fatty acids and cholesterol biosynthesis, or in phospholipid metabolism (Table 1). For more details see poster NR7-009 By comparing gene expression group profiles of all drug classes, it was further discovered that the group of SERMs affected lipid homeostasis in a manner similar to antipsychotics (KS scores of 0.997 and 0.806 for the top 20 and 100 probe sets, respectively) (Table 1 and Figure 2) It has been suggested that estrogen levels play a role in the etiology and/or the severity of schizophrenia symptoms A possible protective effect of estrogen has been proposed based on the observation that, relative to men, women show a delay in onset age of schizophrenia, with a second onset peak after age 44 years1 Symptoms in women affected with schizophrenia have been shown to frequently vary with the menstrual cycle, and to worsen during phases of low estrogen1 It has been reported that dopamine can activate estrogen receptors2 DNA variants which may contribute to the risk for schizophrenia have recently been identified in the estrogen receptor alpha gene (ESR1)3 Several clinical studies have shown that tamoxifen can reduce mania symptoms in patients with bipolar disorder4-6 Symptoms of psychosis and cognitive functioning were also shown to improve in women affected with schizophrenia who were treated with oestradiol or raloxifene7 To gain insights into the mechanism of action of drugs, we studied the expression profile of 12,490 human genes in a cell line treated with a library of 466 compounds used in a variety of disorders, including 18 antipsychotics and 3 selective estrogen receptor modulators (SERMs) (Figure 1) These results give news insights into the mechanism of action of antipsychotics and SERMs and for the first time demonstrate a common effect of these drugs on genes involved in lipid homeostasis Our findings suggest a potential antipsychotic effect of SERMs, which is consistent with several clinical studies that have shown that tamoxifen can reduce mania symptoms, and that raloxifene could improve symptoms of psychosis and cognitive functioning Further studies should be conducted to understand whether and how these molecular changes alter the fluidity of cell membranes of neurons and impact on neuronal connectivity Additional larger clinical studies are needed to better evaluate the potential therapeutic benefit of SERMs for patients affected with schizophrenia or other mental illnesses M e t h o d s R e s u l t s D i s c u s s i o n R e f e r e n c e s C o n c l u s i o n The following information concerns a use that has not been approved by U.S. Food and Drug Administration Figure 2. Selective Estrogen Receptor Modulators Affect Lipid Homeostasis in a Manner Similar to Antipsychotics The amplitude of the 20 probe sets from the antipsychotic signature is represented by a dot for each group of drugs. The size of each dot corresponds to the absolute similarity score (KS value) of these 20 probe sets. Only groups of ^5 drugs from a therapeutic class or subclass are represented here. Pathways of fatty acid and cholesterol biosynthesis are shown with major metabolite intermediates and enzymatic reactions (arrows). Genes coding for relevant enzymes, regulators, or transporters are shown with an asterisk: red for probe sets in the top 100 of both antipsychotic and SERM group profiles, blue in the antipsychotic group profile alone. The 3 SERMs profiled up-regulated the 20 probe sets at the top of the antipsychotic group profile (Figure 3) The group profile of antipsychotics shares 58% of the top 100 probe sets of the SERM group profile, corresponding to 37 different genes Most of the genes up-regulated in common by both groups of antipsychotics and SERMs belong to the biological pathways of fatty acid and cholesterol biosynthesis (Figure 4) The top 20 probe sets of both profiles of the antipsychotics and of the SERMs are listed. * Genes of SREBP responsive mediated signaling pathway. Grigoriadis,S. and Seeman,M.V., 2002. Can J Psychiatry. 47, 437-442. Power,R.F et al. 1991. Science. 254, 1636-1639. Weickert,C.S et al. 2008. Hum Mol Genet. 17, 2293-2309. Kulkarni,J et al. 2006. Psychoneuroendocrinology. 31, 543-547. Zarate,C.A et al. 2007. Bipolar Disord. 9, 561-570. Yildiz,A et al. 2008. Arch Gen Psychiatry. 65, 255-263. Kulkarni,J et al. 2008. Aust N Z J Psychiatry. 42, 83-88. Change in expression between drug treatment and vehicle control is shown by the mean amplitude (Y axis) for each the top 20 ranked probe sets (left to right on the X axis, ordered by rank). The mean amplitude graphed is the average amplitude across replicates. We have discovered a common effect of antipsychotics on the biosynthesis and regulation of fatty acids and cholesterol that is shared by the group of SERMs, which included tamoxifen, raloxifene, and clomiphene These results support an antipsychotic therapeutic effect of SERMs, possibly through the alteration of lipid homeostasis The common effect of antipsychotics and SERMs on genes involved in fatty acids metabolism and cholesterol biosynthesis appears to be specific and strong, as it covers most of all known genes of these biological pathways including a number of Sterol Regulatory Element Binding Proteins responsive genes. This effect was consistent across the various compounds of these 2 classes of drugs This novel observation points to: These results are in agreement with: ESR1 variants which may contribute to the risk of developing schizophrenia have been identified3 possible protective effect of estrogen: delayed age of onset in women, with a second onset peak after age 44 years1 symptoms vary with the menstrual cycle, worsening during phases of low estrogen1 a potential implication of the estrogen pathway in the antipsychotic efficacy response the potential therapeutic benefit of SERMs for patients affected with schizophrenia or other mental illnesses the idea that estrogen plays a role in the etiology and/or the severity of schizophrenia symptoms the results of several clinical studies which have indicated a potential benefit of various SERMs for treating symptoms of common mental disorders, including mania and psychosis in schizophrenia patients4-7 Cell Culture and Drug Treatment Retinal pigment epithelia cell line, ARPE-19/HPV-16 Cell line from glioblastoma origin (H4) used only for independent replication 24 hrs incubation before treatment with 10^M drug or vehicle Gene Expression Profiles RNA extracted after 24 hrs treatment 708 U133A2.0 Affymetrix microarrays analyzed (22,238 probe sets of 12,490 genes) Data Analysis For each drug treatment-vehicle pair all probe sets were ranked by amplitude (A) A= (t-v)/[(t+v)/2] ; t = treatment instance; v = vehicle instance Drug group profiles created with the Weighted Influence Model, Rank of Ranks (WIMRR) method A gene-set enrichment metric based on the Kolmogorov-Smirnov (KS) statistic was used where, for a given set of probes, the KS score gives a measure of how up (positive) or down (negative) the set of probes occurs within the profile of another treatment instance human origin normal karyotype easily grown as monolayer in 96-well plates (~2x10e5 cells/well) expresses the dopamine receptor D2, the serotonin receptors 1A, 2A, and 2C, the muscarinic receptor M3, and the histamine receptor H1 78 the 3 SERMs and the 18 antipsychotics 495 for the other 445 compounds 135 for vehicle controls 466 compounds profiled Supported by funding from Vanda Pharmaceuticals Inc. Presented at the 162nd Annual Meeting of the American Psychiatric Association May 16-21, 2009; San Francisco, CA The information presented here concerns a use that has not been approved by the U.S. Food and Drug Administration |
Table 2. Comparison of Dropout Rates in Active Treatment Arms of PCTs and ACTs Figure 3. PANSS Total Score: Mean Change from Baseline at Week 6, LOCF Analysis of Studies 3000, 3001, 3002, and 3003 Figure 2. Reasons for Discontinuation: A. Active Treatment Arms in PCT and ACTs and B. Placebo Arm and Active Treatment Arms in PCT Figure 1. Cumulative Dropout Rates by Week for PCT and ACTs of Iloperidone Table 3. Comparison of Dropout Rates in Placebo Arms and Active Treatment Arms in PCTs Table 1. Baseline Demographic and Background Characteristics of the Analysis Populations for Studies 3000, 3001, 3002, and 3003 A b s t r a c t I n t r o d u c t i o n NR1-026 Objective: The performance of iloperidone, a new atypical antipsychotic, relative to haloperidol in the treatment of schizophrenia was examined across 4 short-term controlled trials. Methods: Placebo-controlled trials (PCTs) conducted to support registration often include a positive control as an internal measure of assay sensitivity. In a 6-week PCT conducted with iloperidone, haloperidol served as the active control. Because the validity and reliability of active comparisons in PCTs has been questioned, other sources of comparative data were also examined. Three active-controlled trials (ACTs) were conducted comparing iloperidone and haloperidol. While data from these trials were intended to be pooled and formally compared to show non-inferiority with long- term treatment, the short-term (6 week) data from these 3 trials provide another source of information bearing on the relative short-term efficacy. Results: In the PCT, the change from baseline on the PANSS-T differed by 4 points between the iloperidone group and the haloperidol group (intent-to-treat, last- observation-carried-forward (LOCF) analysis). In all 3 ACTs, the effect sizes were numerically similar for iloperidone (mean dose 12 mg/day) and haloperidol (mean dose 12 mg/day), with differences of 0.4, 0.7, and 1.7 points. The dropout rate in the PCT (63%) was twice that observed in each of the 3 ACTs (14-29%). This difference in retention rates between short-term PCTs and ACTs in schizophrenia/schizoaffective patients has been previously observed. Conclusions: Because higher dropout rates force more assumptions about missing data in LOCF analyses, lower dropout rates in the ACTs may allow for a more valid and reliable comparison between drugs. In these perhaps more reproducible and clinically meaningful comparisons, similar effect sizes were observed for iloperidone 12 mg/day and haloperidol 12 mg/day in the treatment of the symptoms of schizophrenia. Vanda Pharmaceuticals sponsored this analysis. The dropout patterns across Studies 3000, 3001, 3002, and 3003 are consistent with the previous observation that trials that include a placebo arm have higher dropout rates in all randomized groups As suggested by Kemmler et al, investigators and patients may both have an increased readiness to stop treatment earlier during PCTs vs. ACTs because they know one of the possible treatments (placebo) is ineffective The lower dropout rates in the ACTs that included iloperidone and haloperidol treatment arms necessitate fewer assumptions about outcome and might therefore provide more reliable and valid estimates of comparative efficacy than the PCT Iloperidone at a dose of 12 mg/day provides comparable efficacy to haloperidol 15 mg/day M e t h o d s R e s u l t s R e f e r e n c e s C o n c l u s i o n The following information concerns a use that has not been approved by U.S. Food and Drug Administration PANSS-Total Scores In the ACTs, Studies 3001, 3002, and 3003, the change-from-baseline PANSS-T scores for the iloperidone and haloperidol groups differed by 0.4, 1.7, and 0.7 respectively (Figure 3) In the PCT, Study 3000, the change-from-baseline PANSS-T scores for the iloperidone and haloperidol groups differed by 4 points (LOCF; p=0.4) Historical Dropout Rates Observed in PCTs and ACTs Kemmler et. al. 2005 reviewed 31 trials 11 PCTs and 20 ACTs Total sample size = 10,058 subjects (42- 1,996 patients/trial) Trial duration = 4-12 weeks Table 2 shows that the attrition rates observed for active arms in PCTs are substantially higher than those in ACTs The difference in mean attrition rate in the active treatment arms between PCTs and ACTs was about 20 percentage points Furthermore, considering only the dropouts due to lack of efficacy, the rates in the active treatment arms were significantly higher (~ 15 percentage points) in PCTs than in ACTs (data not shown) Dropout rates for reasons other than lack of efficacy were similar between the active treatments of PCTs and ACTs (data not shown) The comparative efficacy of iloperidone (12 mg/day) and haloperidol (15 mg/day) was investigated across 4 phase III short-term controlled trials: 1 placebo-controlled trial (PCT) and 3 active-controlled trials (ACTs) Study 3000 Six-week, randomized, double-blind, PCT; US centers Five randomized groups: Placebo (N=127), iloperidone 4 mg/day (N=121), iloperidone 8 mg/day (N=125), iloperidone 12 mg/day (N=124), and haloperidol 15 mg/day (N=124) to provide assay sensitivity Only the iloperidone 12 mg/day and the haloperidol 15 mg/day groups were considered for this comparative efficacy evaluation Study 3001 Six-week, randomized, double-blind, haloperidol-ACT; European centers Iloperidone 4-16 mg/day, mean dose of 11.4 mg/day at week 6, (N=454), haloperidol 5-20 mg/day, mean dose of 11.9 mg/day at week 6, (N=146) Study 3002 Six-week, randomized, double-blind, haloperidol-ACT; Asian Pacific centers Iloperidone 4-16 mg/day, mean dose of 12.9 mg/day at week 6, (N=420), haloperidol 5-20 mg/day, mean dose of 14.0 mg/day at week 6, (N=137) Study 3003 Six-week, randomized, double-blind, haloperidol-ACT; Mexican and Southern American centers Iloperidone 4-16 mg/day, mean dose of 13.3 mg/day at week 6, (N=365), haloperidol 5-20 mg/day, mean dose of 14.5 mg/day at week 6, (N=122) Main Inclusion Criteria Male and non-pregnant female patients ages 18-65 Diagnosis of schizophrenia or schizoaffective disorder according to DSM-IV Positive and Negative Syndrome Scale Total (PANSS-T) ^ 60 Comparative Efficacy Evaluation Post hoc comparisons of iloperidone- and haloperidol-treated patients Not designed for statistical inference Outcome Measure for Comparisons: Mean change from baseline at Week 6 in PANSS-T score, Last Observation Carried Forward (LOCF) Table 3 shows that dropout rates are more common in the placebo arms than in the active treatment arms in PCTs The difference in mean attrition rate in the placebo arm and the active treatment arm was about 10 percentage points The difference in dropout rate in the active treatment group between PCTs and ACTs was considerably larger that those seen between placebo and active treatment within PCTs The dropout rates in the active treatment arms of the PCT were significantly higher than the dropout rates in the ACTs throughout the whole 6-weeks (Figure 1) By the end of the 6-week double-blind portion of the study, the dropout rates for the active treatment arms were 62% for the PCT and 19% for the ACTs (Figure 2A) Within the PCT, the dropout rate in the placebo arm was higher (69%) than the drop-out rate in the combined iloperidone and haloperidol arms (62%) (Figure 2B) The most common reasons for discontinuation in all studies were unsatisfactory therapeutic effect and withdrawal of informed consent The dropout rate due to unsatisfactory therapeutic effect and withdrawal of informed consent in the active treatment arms were much higher in the PCT (27% and 21%, respectively) than in the ACTs (7% and 7%, respectively) (Figure 2A) The dropout rates were consistent across all other reasons for discontinuation Iloperidone, a mixed D2/5-HT2 receptor antagonist, is a new atypical antipsychotic Clinicians understandably want to know how the efficacy of a new drug product compares to the efficacy of older established drug products Recent actions by Congress, HHS, and FDA suggest increasing interest in comparative efficacy data Before making generalizations about comparative efficacy based on results from clinical trials, factors that may influence the results of clinical trials needs to be investigated Assay Sensitivity A large percentage (25 %) of placebo-controlled trials of effective drugs for schizophrenia fail to demonstrate a difference between the drug and placebo (1) Therefore, in trials of new drugs, an active control group is often included in the trial design to determine assay sensitivity If the new drug fails to separate from placebo, the performance of the positive control helps determine whether the new drug truly failed or whether the study was incapable of showing a difference (poor assay sensitivity) Previously published work demonstrates that dropout rates from the active treatment arms in short-term trials in schizophrenia are systematically greater in trials that include a placebo arm (2) Laughren TP. The scientific and ethical basis for placebo-controlled trials in depression and schizophrenia: an FDA perspective. Eur Psychiatry 2001, 16: 418-423 Kemmler G, Hummer M, Widschwendter C, and Fleischhacker WW. Dropout rates in placebo-controlled and active-control clinical trials of antipsychotic drugs: a meta-analysis. Arch Gen Psychiatry 2005; 62:1305-1312 Patient Demographics Baseline demographics of iloperidone-, haloperidol-, and placebo-treated patients were similar across all studies (Table 1) Kemmler's hypothesis to explain different dropout rates: Health care providers may have an increased readiness during PCTs vs. ACTs to discontinue a patient early for lack of efficacy because they know one of the possible treatments (placebo) is ineffective Patients may be less willing to wait for signs of improvement in a PCT vs. ACT knowing that one of the possible treatments (placebo) is ineffective A c k n o w l e d g m e n t s We thank all the individuals who participated in these studies and the entire team that conducted the clinical trials. We would also like to thank Dr. Rosarelis Torres for her critical contribution to this poster. * Adapted from Kemmler et.al. 2005 * Adapted from Kemmler et.al. 2005 Dropout Rates Observed Across Four Iloperidone Studies The cumulative dropout rates, per week, during the initial 6-weeks double-blind phase of studies 3000, 3001, 3002, and 3003 are shown in Figure 1 Supported by funding from Vanda Pharmaceuticals Inc. Presented at the 162nd Annual Meeting of the American Psychiatric Association May 16-21, 2009; San Francisco, CA |
Figure 3. Genotype Effect of DRD2 SNPs on Iloperidone Efficacy at Day 14 Figure 2. Baseline PANSS-T Score and DRD2 Genotypes Figure 4. Taq1A Genotype Effect on Iloperidone Response Table 1. DRD2 Polymorphisms Analyzed Table 2. Allele and Genotype Frequencies Figure 1. Genome View of the DRD2 Gene and Associated SNPs A b s t r a c t I n t r o d u c t i o n NR1-058 Objective: It has been proposed that single nucleotide polymorphisms (SNPs) in the dopamine receptor 2 gene (DRD2) play a role in the presentation of schizophrenia symptoms and their treatment, and may explain some inter-individual differences observed in antipsychotic response. Iloperidone is a novel mixed D2/5-HT2 antagonist with high affinity for DRD2. In clinical trials, iloperidone has demonstrated efficacy for a broad range of schizophrenia symptoms, with a favorable profile on key metabolic parameters and on movement disorders (extrapyramidal symptoms and akathisia). A pharmacogenetic analysis of DRD2 was conducted in a phase III clinical trial to identify DNA polymorphisms predictive of iloperidone response. Method: A mixed-effects model repeated measures analysis was performed by genotype, for several DRD2 SNPs, on improvement of symptoms assessed by the Positive and Negative Syndrome Scale Total (PANSS-T) score. Results: SNP allele frequencies varied across populations. Genotype differences were statistically significant between Blacks, Whites and Asians. In the overall population, and in Whites alone, one SNP (Taq1A, rs1800497), located in the 3' region of DRD2, was significantly associated (p^0.05) with iloperidone efficacy at days 7, 10, 14 and 21, but not at day 28. The same trend was observed in Blacks, but did not reach statistical significance. Conclusions: These results suggest that rs1800497 may contribute to the early inter- individual differences in the therapeutic efficacy of iloperidone. To explain these findings, the functional effect of rs1800497 on the expression and/or function of DRD2 remains to be investigated. This study provides new insights into the response to iloperidone, developed with the ultimate goal of directing therapy to patients with the highest benefit-to-risk ratio. Vanda Pharmaceuticals sponsored this study. It has been proposed that polymorphisms in the DRD2 gene play a role in the etiology of schizophrenia symptoms and their treatment Several DRD2 polymorphisms affect the binding affinity of neuroleptics1,2, supporting the idea that they may explain some of the inter-individual differences observed in response to treatment3-6 Iloperidone is a novel mixed D2/5-HT2 antagonist with high affinity for the dopamine D2 receptor7,8 We have previously reported the discovery, in a whole genome association study (WGAS), of 6 genetic markers associated with iloperidone efficacy in a phase III clinical trial9 The aim of the present study was to further understand inter-individual differences of iloperidone efficacy by analyzing various common DRD2 polymorphisms previously associated with response to other antipsychotics but not available on the microarray platform used for the WGAS Several single nucleotide polymorphisms (SNPs) in the DRD2 gene are expected to have functional significance, and have been analyzed for possible association with the risk of developing schizophrenia and with the response to antipsychotic medications (Table 1 & Figure 1) In the study reported here, the possible effects of the -241A/G, -141C Ins/Del, His313His, Taq1A, rs2283265 and rs1076560 polymorphisms were evaluated in 409 patients who participated in a phase III clinical trial which assessed the efficacy of iloperidone as measured by changes in the Positive and Negative Syndrome Scale Total (PANSS-T) These results suggest that the DRD2 Taq1A polymorphism (rs1800497) may contribute to the early inter-individual differences in the therapeutic efficacy of iloperidone The functional effect of rs1800497 on the expression and/or function of DRD2 remains to be investigated, and additional pharmacogenomic studies should be conducted to confirm the clinical value and the predictive application of this finding This study provides new insights into the response to iloperidone, developed with the ultimate goal of directing therapy to patients with the highest benefit-to-risk ratio M e t h o d s R e s u l t s D i s c u s s i o n R e f e r e n c e s C o n c l u s i o n The following information concerns a use that has not been approved by U.S. Food and Drug Administration Vertical bars represent exons. The red bar shows the alternatively spliced exon 6 of DRD2. The white arrows show the location of SNPs previously typed in a whole genome association study. The black arrows points to the location of the SNPs analyzed in the study presented here. Rs1800497 originally assigned to DRD2 was later shown to be located within ANKK1. The genotype effect of the DRD2 SNPs on iloperidone efficacy was evaluated overall and separately in the Black and the White populations The highest signal was detected in the 3' region of the DRD2 gene, with the lowest p value obtained with the Taq1A polymorphism in the Whites at day 14 (Figure 3) A statistical significant effect was observed at days 7, 10, 14 and 21 (Figure 4); the largest difference was detected between the two Taq1A genotype classes at day 14, with a mean change in PANSS-T of -12.7 (+-2.1) for non-A1/A2 patients treated with iloperidone versus - -2.1 (+-2.7) for patients who carry the A1/A2 genotype (p=0.003) A numerical difference remained between the two genotype groups at day 28 in Whites (Figure 4A), and was also observed in Blacks across the entire trial (Figure 4B), but without reaching statistical significance Both intronic SNPs were also significantly associated with iloperidone response in the White population at day 14 (p=0.01 and p=0.05 for rs2283265 and rs1076560 respectively). Whites carrying the non-G/T genotype for rs2283265 experienced higher efficacy (PANSS-T with mean change of -11.8 (+-2.0) than patients with the G/T genotype, - -2.4 (+-3.0); p=0.01 The Taq1A polymorphism (rs1800497) was shown to be associated with iloperidone efficacy. The strongest statistical significance was obtained at day 14, while the 6 genetic markers previously discovered showed the strongest association with iloperidone response at day 28 Analysis of the combination of all these markers may clarify if the Taq1A polymorphism has an additive predictive value, or if it is a distinct marker of early response At this time, it is still unknown whether this Taq1A polymorphism affects the function of the dopamine receptor D2 or the protein encoded by ANKK1, and how it influences antipsychotic response In our study, this genetic marker did not appear to differentiate patients for their response to ziprasidone. It is possible that the limited number of patients treated with ziprasidone was not sufficient to reach statistical significance between genotypes PANSS-T score (Y axis) is shown per genotype White Black P values (vertical axis) from the MMRM analysis of change in PANNS-T are shown for the genomic region containing the DRD2 gene in order of the SNPs' physical locations (horizontal axis), in the White and Black populations separately. Pohjalainen T et al. Mol.Psychiatry 1998; 3:256-260 Wu S et al. Neurosci Lett. 2005; 376:1-4 Dubertret C, et al. Schizophr Res 2001; 49:203-212 Lane HY et al. Int.J Neuropsychopharmacol. 2004; 7:461-470 Lencz T et al. Am J Psychiatry 2006; 163:529-531 Vijayan NN et al. Behav.Brain Funct. 2007; 3:34 Kalkman HO et al. Life Sci. 2003; 73:1151-1159 Szewczak MR et al. J Pharmacol Exp Ther. 1995; 274:1404- 1413 Lavedan C et al. Mol.Psychiatry 2008; [Epub ahead of print] Jonsson EG et al. Mol.Psychiatry 1999; 4:290-296 Ritchie T et al. Neurochem.Res 2003; 28:73-82 Xing Q et al. 2007; 10:631-637 Wu S et al. 2005; 376:1-4 Zhang Y et al. Proc.Natl.Acad.Sci U.S.A 2007; 104:20552- 20557 Laakso A et al. Pharmacogenet.Genomics 2005; 15:387-391 Dubertret C et al. Schizophr Res 2004; 67:75-85 Golimbet VE et al. Neurosci Behav.Physiol 2003; 33:223-225 Cutler,A.J et al. J Clin Psychopharmacol. 2008; 28, S20-S28 Arinami T et al. Hum Mol Genet. 1997 Apr;6(4):577-82. Behravan J et al. Arch Iran Med. 2008 May;11(3):252-6 Barrett JC et al. Bioinformatics. 2005; 21:263-265 Effect of the Taq1A polymorphism on iloperidone response is shown for the white (1) and black (2) populations, per genotype group (A1/A2 in green, non-A1/A2 in blue). * p<0.05. Clinical Trial This 4-week, randomized, double-blind, placebo- and ziprasidone-controlled, multicenter inpatient phase III trial evaluated efficacy, safety, and tolerability of iloperidone in patients with an acute exacerbation of schizophrenia. The design, conduct, and overall results of the clinical study have been previously reported18 Treatment Random assignment (2:1:1) Efficacy Measured by the change from baseline in the PANSS-T score Analysis Genotype assays were performed as previously reported9,19,20 Hardy-Weinberg equilibrium (HWE) analysis was performed using Haploview 4.121 A mixed-effects model repeated measures analysis was performed by genotype on improvement of symptoms assessed by the PANSS-T score Iloperidone 24 mg/d (12 mg bid); N=218 Ziprasidone 160 mg/d (80 mg bid); N=103 Placebo; N=105 Supported by funding from Vanda Pharmaceuticals Inc. The allele frequencies of the DRD2 SNPs were found to vary across populations (Table 2), as reported in other studies (http://www.ncbi.nlm.nih.gov/SNP) For -141C Ins/Del and His313His, genotype differences were statistically significant between Blacks, Whites and Asians (Fisher's exact test, p = 10-18, p = 5.3 x 10-12 respectively). However, no significant deviation from Hardy-Weinberg equilibrium was observed within either population The genotype distribution of rs2283265, and rs1076560 was statistically different between Blacks and Whites (p = 5.5 x 10-7, p= 3.6 x 10-7 respectively) As previously reported in Caucasians15, the Taq1A polymorphism (rs1800497) and the 2 intronic SNPs (rs2283265 and rs1076560) were in strong LD in both the Black and White populations (D'=1, LOD>2) None of these SNPs was associated with baseline PANSS-T in the overall study population or within either the Black or the White population (Figure 2) Presented at the 162nd Annual Meeting of the American Psychiatric Association May 16-21, 2009; San Francisco, CA |
Figure 4. 95% Confidence Intervals Figure 1. Mean Change from Baseline, BPRS by Drop-out Cohorts Figure 2. Patients Treated ^ 14 Days - BPRS Figure 3. Patients Treated ^ 14 Days - PANSS-T Table 2. Adjusted Mean Change on BPRS and PANSS-T Table 1. Randomization and Titration Schedules A b s t r a c t I n t r o d u c t i o n NR1-033 Objective: In trials to establish the efficacy of antipsychotics, patients are prone to drop out early if they experience unsatisfactory results in the initial days of the study. Although statisticians generally acknowledge that results from LOCF are biased, its use in regulatory settings has persisted for various reasons. As an alternative to LOCF, we implemented a simplified pattern mixture model approach to examine the efficacy of iloperidone and risperidone in a placebo-controlled Phase 3 study. Methods: The efficacy of iloperidone at a dose range of 12-24 mg/d was evaluated in a 6-week, double-blind, placebo- and active-controlled (risperidone 6-8 mg/d) trial of acute exacerbation of schizophrenia. Dropout cohort data was analyzed to determine what effect dropouts had on efficacy measures. Based on the longer titration period for iloperidone, an analysis was conducted implementing length of stay into the model and a subgroup analysis using LOCF of patients that received ^14 days of treatment. Results: The length of stay covariate was significant (p<0.001) and when adjusting for length of stay, both dose groups of iloperidone, 12-16 mg/d and 20-24 mg/d showed significantly greater improvement than placebo on the PANSS-T (-12.6; p=0.021 and - 15.4; p=0.001, respectively) and BRPS (-8.1; p=0.0.018 and -9.4; p=0.001, respectively) and both iloperidone treatments are similar to risperidone on PANSS-T (- 15.6; p=<0.001) and BPRS (-9.6; p=0.001). An LOCF analysis of patients with ^14 days of treatment confirms the comparable efficacy of iloperidone to risperidone, supported from the overlapping 95% confidence intervals and by the observed cases data at Week 6. Conclusion: In this Phase 3 schizophrenia trial, an analysis which adjusts for drug titration differences, showed that iloperidone was more effective than placebo and comparable to risperidone for the treatment of acute psychotic exacerbation. Vanda Pharmaceuticals sponsored this study. Phase III, randomized, double-blind, placebo- and risperidone (RIS)-controlled trial conducted at 32 centers in the US and 35 non-US centers1 Inpatients were randomized to one of four treatment arms: iloperidone (12-16 mg/d), iloperidone (20-24 mg/d), risperidone (6-8 mg/d) and placebo Randomization and titration schedules are shown in Table 1 Patients main inclusion criteria Men or woman aged 18 to 65 years DSM-IV diagnosis of schizophrenia or schizoaffective disorder and need for psychiatric treatment Baseline Positive and Negative Syndrome Scale Total (PANSS-T) score ^ 60 Baseline PANSS positive (PANSS-P) ratings ^ 4 for 3 or more of the following items: delusions, conceptual disorganization, hallucinatory behavior, grandiosity, and suspiciousness/persecution Patients main exclusion criteria Primary psychiatric diagnosis (Axis I) or comorbid diagnosis (Axis II), other than schizophrenia Diagnosis of a substance abuse disorder Patients with psychotic symptoms failing to improve following sufficient exposure to a therapeutic dose of any antipsychotic treatment for the prior 2 years Statistics Efficacy analyses were based on the intent-to-treat population, comprising all patients receiving ^ 1 dose of study medication with ^ 1 complete PANSS assessment using LOCF method with the following adaptations - All patients by drop-out cohorts - All patients with length of stay as a covariate - Only patients who received ^ 14 days of treatment Iloperidone (ILO), a mixed D2/5-HT2 antagonist, is a novel antipsychotic medication approved by the Food and Drug Administration (FDA) for the acute treatment of adults with schizophrenia The majority of Phase III clinical trials for antipsychotics are run as placebo- controlled trials including an active control for assay sensitivity When an active comparator is being used for assay sensitivity, titration schedules between the drug being studied and the active comparator can lead to a bias in efficacy measures The bias may result because patients are prone to drop out early if they experience unsatisfactory results in the initial days of the study which have an impact on Last Observation Carried Forward (LOCF) analysis Although statisticians generally acknowledge that LOCF has the potential to introduce bias, its use in regulatory settings has persisted for various reasons Instead of using LOCF, we implemented alternative approaches such as: (1) using length of stay in the study and (2) looking at patients who received ^ 14 days of treatment to examine the efficacy of iloperidone and risperidone2 These approaches allow for the comparison of drug effects in patients with similar lengths of stay in the study or who reach steady-state drug levels at different times The analysis of length of stay is a simplistic method where the timing and pattern of drop-outs is used as a covariate to inform and construct the statistical model The results demonstrate that the length of stay covariate is significant (p<0.001) When adjusting for length of stay, two key observations are made: - Iloperidone 12-16mg and 20-24 mg doses are significantly superior to placebo - Both iloperidone treatments are similar to risperidone 6-8 mg An LOCF analysis of patients with ^14 days of treatment confirms the comparable efficacy of iloperidone to risperidone 12-16 mg/d and 20-24 mg/d doses to risperidone 6-8 mg/d This comparable efficacy is further supported the overlapping 95% confidence intervals M e t h o d s R e f e r e n c e s C o n c l u s i o n Potkin SG, Litman RE, Torres R, Wolfgang CD. Efficacy of iloperidone in the treatment of schizophrenia: initial phase 3 studies. J Clin Psychopharmacol. 2008; 28(2 Suppl 1):S4-11. Dantan E, Proust-Lima C, Letenneur L, Jacqmin-Gadd, H. Pattern mixture models and latent class models for the analysis of multivariate longitudinal data with informative dropouts. International Journal of Biostatistics. 2008: 4(1):Article 14. The results (Table 2) demonstrate that the length of stay covariate is significant (p<0.001) When adjusting for length of stay (Table 2) , two key observations are made: - Iloperidone 12-16 mg and 20-24 mg doses are significantly superior to placebo - Both iloperidone treatments are similar to risperidone 6-8 mg The comparable efficacy between iloperidone and risperidone is further supported by the overlapping 95% confidence intervals on both the BPRS and PANSS-T scores (Figure 4) Another method to look at how the drop-out of the first 2 weeks with iloperidone impacts the LOCF analysis is to only look at those patients that stayed in the study and achieved steady-state levels of iloperidone ^ 14-days (Figures 2 & 3) Because of the 1-week titration of iloperidone and the 3-4 additional days of treatment needed to achieve steady-state exposures (~17-hr half-life), it is not surprising to observe that patients treated with iloperidone do not have the opportunity to experience a full therapeutic effect until receiving ~14 days of treatment as observed when looking at the mean change from baseline for BPRS drop-out cohorts as shown in Figure 1 R e s u l t s The differences of drop-out rates suggests that more patients generally dropped out from the iloperidone and placebo arms as compared to the risperidone arms These drop-out rate differences were exacerbated in the first two weeks of the study As discussed, such unbalanced drop-out rates in both numbers and timing can potentially impact outcomes under some analyses, including the LOCF analysis The length of stay analysis attempts to account for the differences and inform the statistical model, when efficacy comparisons across drugs are performed (Table 2) * = p-value ? 0.05 vs placebo * = p-value ? 0.05 vs placebo Placebo-Corrected Change from Baseline with 95% Confidence Intervals >2 Week Population - Last observation carried forward, BPRS or PANSS-T Scores PANSS-T BPRS Ilo=iloperidone; Ris=risperidone; Pbo=placebo aPlacebo run-in period lasted a minimum of 3 days; the last day of placebo run-in Period was baseline (Day 0) bTitration target dose The number of patients who drop-out is indicated per cohort. Supported by funding from Vanda Pharmaceuticals Inc. An LOCF analysis of patients with ^14 days of treatment (75% of the patients) confirms the comparable efficacy of iloperidone to risperidone on both the BPRS and PANSS-T scores (Figures 2 & 3) Presented at the 162nd Annual Meeting of the American Psychiatric Association May 16-21, 2009; San Francisco, CA |
Figure 5. Genotype Effect in the 6-month Extension Period for Patients Previously Treated with a Placebo or Ziprasidone Figure 4. Genotype Effect in the Extension Phase (Day 29 to 203) for Patients Previously Treated with Placebo or Ziprasidone (Day 0 to 28) Figure 3. Study Design Figure 1. Efficacy, Per Genotype, in Patients Treated with Iloperidone in the 28-day Double-Blind Phase of the 3101 Study Figure 2. Genotype Effect for Patients Treated with Iloperidone in a 28-Day Clinical Trial A b s t r a c t I n t r o d u c t i o n NR1-095 Objective: In a double-blind, placebo- and active-controlled phase III clinical trial, 6 single nucleotide polymorphisms (SNPs) were found to be associated with the efficacy of a novel antipsychotic, iloperidone, during the short-term phase of the study. Patients, who received iloperidone, ziprasidone or placebo for four weeks, were then enrolled in an optional open-label 6-month extension phase where they all received iloperidone. A pharmacogenetic analysis was conducted in the extension phase for the individuals who switched to iloperidone, in an attempt to validate the genotype effect of the 6 SNPs in this independent group of patients. Method: Analysis of the genotype effect on iloperidone response, as measured by change in the Positive and Negative Syndrome Scale Total (PANSS-T) score, was performed using a general linear model with baseline value as a covariate. For patients who switched to iloperidone, PANSS-T was analyzed at the end of the study (day 203) as improvement from the baseline of the extension phase. Results: A statistical significant association was observed between iloperidone efficacy and SNP rs4528226 genotypes for patients who switched from ziprasidone or placebo to iloperidone. Despite a relative small number of patients available, SNPs rs11851892, rs9643483, rs875326, and rs7837682 showed a similar trend without, however, reaching statistical significance. These results are consistent with the genotype effects observed for iloperidone-treated patients in the short-term phase of the clinical trial. Conclusions: This study is a first step in validating the 6 iloperidone efficacy markers in an independent population. The findings reported here support the application of pharmacogenomics to differentiate medication options and improve individualized treatments for schizophrenia. Vanda Pharmaceuticals sponsored this study. Iloperidone is a novel mixed D2/5-HT2 antagonist with high affinity for the dopamine D2 receptor. In clinical trials, iloperidone has demonstrated efficacy for a broad range of schizophrenia symptoms with a favorable profile on key metabolic parameters and movement disorders (extrapyramidal symptoms and akathisia)1-4 We have previously reported the association of 6 single nucleotide polymorphisms with treatment response for patients affected with schizophrenia who received iloperidone in the 28 day double-blind period of a phase III clinical trial (Figure 1)5 Genotype groups Overall, patients from groups II, III, and IV but not from group I tend to improve after switching to iloperidone (Figure 5) As seen in the 28 day-phase treatment with iloperidone (Figure 2), patients from group IV who switched to iloperidone show the strongest response (Figure 5C) The same trend was observed regardless of the treatment [placebo (Figure 5A), or ziprasidone (Figure 5B)] that those patients had received during the short-term phase When combining data from patients from both the placebo and ziprasidone groups, a pairwise comparison of the genotypes associated with the highest (group IV) or lowest (group I) response provided a significance level of 0.054 We studied 6 genetic markers associated with iloperidone efficacy, previously discovered in an analysis of the 28-day short-term phase of a phase III clinical trial5 A new analysis was conducted in patients who had previously received either a placebo or ziprasidone during the 28-day short-term phase, and who were then treated with iloperidone in a 6-month extension phase These patients constitute an independent sample population since they were not part of the iloperidone-treated patients analyzed previously The analysis of each individual SNP showed the same genotype trend previously observed for iloperidone-treated patients, for 5 of the 6 genetic markers Statistical significance was reached for SNP rs4528226, which had previously showed the stronger association with iloperidone efficacy in the short-term study5 We have defined 4 groups of genotype combinations (groups I to IV) based on the number of predictive genotypes associated with enhanced response, and showed that the probability of response to iloperidone treatment increased with the number of favorable genotypes carried by a patient6 Despite the small number of patients who were studied in the open-label 6-month extension, the effect observed between the various genotype groups was consistent with the previous findings obtained with a different group of patients. For patients treated with iloperidone in the 6-month extension phase, a similar effect was observed regardless of the treatment (placebo, or ziprasidone) that these patients had received during the short term phase This study is a first step in validating the 6 iloperidone efficacy markers in an independent population The findings reported here support the application of pharmacogenomics to differentiate medication options and improve individualized treatments for patients affected with schizophrenia Additional pharmacogenomic analyses should be conducted in a large sample population to confirm and refine the predictive value and the clinical application of the 6 genetic markers associated with iloperidone efficacy, either individually or as a group M e t h o d s D i s c u s s i o n R e f e r e n c e s C o n c l u s i o n We defined 4 groups of genotype combinations (groups I to IV) based on the number of predictive genotypes associated with enhanced response, and showed that the probability of response to iloperidone treatment increased with the number of favorable genotypes carried by a patient (Figure 2)6 The design, conduct, and overall results of the clinical study have been reported previously.3 Briefly, schizophrenia patients were randomly assigned to iloperidone 12 mg twice a day, ziprasidone 80 mg twice a day, or placebo. At day 29, those patients choosing to enter the long-term phase of the trial began iloperidone treatment (12 mg once or twice daily) Response to treatment was measured by change in the Positive and Negative Syndrome Scale Total (PANSS-T) score Analysis of the genotype effect was performed using a general linear model with baseline value as a covariate For patients who switched to iloperidone, PANSS-T was analyzed at the end of the study (day 203) as improvement from the baseline of the extension phase (day 29) R e s u l t s Individual SNPs For 5 of the 6 SNPs, the same genotype trend observed for iloperidone-treated patients in the short-term phase was also observed in the long-term phase for patients who switched from placebo or ziprasidone to iloperidone at the beginning of the open-label phase (Figure 4) The effect of one SNP (rs2513265, GRIA4) could not be assessed because the minor allele was not observed in any of the patients who completed the long-term phase after receiving either placebo or ziprasidone in the short-term phase (Figure 4) Statistical significance was reached for SNP rs4528226 (Figure 4), which had previously showed the stronger association with iloperidone efficacy in the short-term study (Figure 1) P values from the mixed-effects model repeated measures (MMRM) analysis are shown for each SNP. In an attempt to validate this finding in an independent group of patients, we analyzed the genotype effect of the 6 SNPs in patients treated with iloperidone in an optional open-label 6-month extension phase. These patients had previously received ziprasidone or placebo in the first 28 day double-blind period of the study (Figure 3) Despite the relative small number of patients who completed the 6-month extension period, the same genotype trend observed for iloperidone in the ST phase was also observed in the LT phase with 5 of the 6 SNPs in patients who switched from placebo or ziprasidone to iloperidone at the beginning of the open-label phase The number of iloperidone-treated in each genotype group patients is indicated in parentheses. P= Placebo group, Z = Ziprasidone group. * These patients were treated in the short-term phase of the study with either a placebo or ziprasidone. A B C Potkin,S.G., Litman,R.E., Torres,R. & Wolfgang,C.D. Efficacy of iloperidone in the treatment of schizophrenia: initial phase 3 studies. J Clin Psychopharmacol. 28, S4-11 (2008). Weiden,P.J., Cutler,A.J., Polymeropoulos,M.H. & Wolfgang,C.D. Safety profile of iloperidone: a pooled analysis of 6-week acute-phase pivotal trials. J Clin Psychopharmacol. 28, S12-S19 (2008). Cutler,A.J., Kalali,A.H., Weiden,P.J., Hamilton,J. & Wolfgang,C.D. Four-week, double-blind, placebo- and ziprasidone-controlled trial of iloperidone in patients with acute exacerbations of schizophrenia. J Clin Psychopharmacol. 28, S20-S28 (2008). Kane,J.M., Lauriello,J., Laska,E., Di Marino,M. & Wolfgang,C.D. Long-term efficacy and safety of iloperidone: results from 3 clinical trials for the treatment of schizophrenia. J Clin Psychopharmacol. 28, S29-S35 (2008). Lavedan,C. et al. Association of the NPAS3 gene and five other loci with response to the antipsychotic iloperidone identified in a whole genome association study. Mol. Psychiatry (2008). Volpi,S., Potkin,S.G, Malhotra,A.K., Licamele,L., Lavedan,C. Applicability of a genetic signature for enhanced iloperidone efficacy in the treatment of schizophrenia. J Clin Psychiatry (in press) Change from Baseline to Endpoint in PANSS-T Change from Day 29 to Endpoint in PANSS-T Supported by funding from Vanda Pharmaceuticals Inc. Presented at the 162nd Annual Meeting of the American Psychiatric Association May 16-21, 2009; San Francisco, CA |