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UNITED STATES
SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549

SCHEDULE 14A

Proxy Statement Pursuant to Section 14(a) of the Securities
Exchange Act of 1934 (Amendment No.     )

  Filed by the Registrant   þ
  Filed by a Party other than the Registrant   o
 
  Check the appropriate box:

  o   Preliminary Proxy Statement
  o   Confidential, for Use of the Commission Only (as permitted by Rule 14a-6(e)(2))
  þ   Definitive Proxy Statement
  o   Definitive Additional Materials
  o   Soliciting Material Pursuant to §240.14a-12

VANDA PHARMACEUTICALS INC.


(Name of Registrant as Specified In Its Charter)


(Name of Person(s) Filing Proxy Statement, if other than the Registrant)

      Payment of Filing Fee (Check the appropriate box):

  þ   No fee required.
  o   Fee computed on table below per Exchange Act Rules 14a-6(i)(1) and 0-11.

   1)   Title of each class of securities to which transaction applies:

   2)   Aggregate number of securities to which transaction applies:

   3)   Per unit price or other underlying value of transaction computed pursuant to Exchange Act Rule 0-11 (set forth the amount on which
       the filing fee is calculated and state how it was determined):

   4)   Proposed maximum aggregate value of transaction:

   5)   Total fee paid:

  o   Fee paid previously with preliminary materials.

  o   Check box if any part of the fee is offset as provided by Exchange Act Rule 0-11(a)(2) and identify the filing for which the
       offsetting fee was paid previously. Identify the previous filing by registration statement number, or the Form or Schedule and
       the date of its filing.

   1)   Amount Previously Paid:

   2)   Form, Schedule or Registration Statement No.:

   3)   Filing Party:

   4)   Date Filed:


 

 
April 10, 2007
 
Dear Stockholder:
 
I am pleased to invite you to attend Vanda Pharmaceuticals Inc.’s 2007 Annual Meeting of Stockholders, to be held on Wednesday, May 16, 2007 at 9605 Medical Center Drive, Rockville, Maryland. The meeting will begin promptly at 9:00 a.m., local time.
 
Enclosed are the following:
 
  •  our Notice of Annual Meeting of Stockholders and Proxy Statement for 2007;
 
  •  our Annual Report for 2006 (containing our annual report on Form 10-K filed with the SEC); and
 
  •  a proxy card with a return envelope to record your vote.
 
Details regarding the business to be conducted at the Annual Meeting are more fully described in the accompanying Notice of Annual Meeting of Stockholders and Proxy Statement.
 
Your vote is important. Whether or not you expect to attend, please date, sign, and return your proxy card in the enclosed envelope according to the instructions in the Proxy Statement as soon as possible to ensure that your shares will be represented and voted at the Annual Meeting. If you attend the Annual Meeting, you may vote your shares in person (even though you may have previously voted by proxy) if you follow the instructions in the Proxy Statement.
 
On behalf of your Board of Directors, thank you for your continued support and interest.
 
Sincerely,
 
-s- Mihael H. Polymeropoulos, M.D.
 
Mihael H. Polymeropoulos, M.D.
Chief Executive Officer
 
9605 Medical Center Drive, Suite 300
Rockville, Maryland 20850
Telephone: 240.599.4500
Facsimile: 301.294.1900
www.vandapharma.com


 

TABLE OF CONTENTS

QUESTIONS AND ANSWERS ABOUT THIS PROXY MATERIAL AND VOTING
PROPOSAL 1 ELECTION OF DIRECTORS
THE BOARD OF DIRECTORS RECOMMENDS A VOTE IN FAVOR OF EACH NAMED NOMINEE.
PROPOSAL 2 RATIFICATION OF SELECTION OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM
EXECUTIVE OFFICERS
SECURITY OWNERSHIP OF CERTAIN BENEFICIAL OWNERS AND MANAGEMENT
BENEFICIAL OWNERSHIP REPORTING COMPLIANCE
COMPENSATION OF EXECUTIVE OFFICERS
 
Vanda Pharmaceuticals Inc.
9605 Medical Center Drive, Suite 300
Rockville, Maryland 20850

NOTICE OF ANNUAL MEETING OF STOCKHOLDERS
To Be Held On May 16, 2007
 
Dear Stockholder:
 
You are cordially invited to attend the Annual Meeting of Stockholders of Vanda Pharmaceuticals Inc., a Delaware corporation (the “Company”). The meeting will be held on Wednesday, May 16, 2007, at 9:00 a.m. local time at 9605 Medical Center Drive, Rockville, Maryland for the following purposes:
 
1. To elect Dr. James B. Tananbaum, Mr. David Ramsay and Mr. H. Thomas Watkins to the Board of Directors, to serve as Class I directors until the 2010 annual meeting of stockholders.
 
2. To ratify the selection of PricewaterhouseCoopers LLP as the independent registered public accounting firm of the Company for the year ending December 31, 2007.
 
3. To conduct any other business properly brought before the meeting.
 
These items of business are more fully described in the Proxy Statement accompanying this Notice.
 
The record date for the Annual Meeting is April 5, 2007. Only stockholders of record at the close of business on that date may vote at the meeting or any adjournment thereof.
 
By Order of the Board of Directors
 
-s- William D. Clark
 
William D. “Chip” Clark
Senior Vice President, Chief Business
Officer and Secretary
 
Rockville, Maryland
April 10, 2007
 
 
You are cordially invited to attend the meeting in person. Whether or not you expect to attend the meeting, please complete, date, sign and return the enclosed proxy card as promptly as possible in order to ensure your representation at the meeting. A return envelope (which is postage prepaid if mailed in the United States) is enclosed for your convenience. Even if you have voted by proxy, you may still vote in person if you attend the meeting. Please note, however, that if your shares are held of record by a broker, bank or other nominee and you wish to vote at the meeting, you must obtain a proxy issued in your name from that record holder.
 
 


 

Vanda Pharmaceuticals Inc.
9605 Medical Center Drive, Suite 300
Rockville, Maryland 20850

PROXY STATEMENT
FOR THE 2007 ANNUAL MEETING OF STOCKHOLDERS
 
May 16, 2007
 
QUESTIONS AND ANSWERS ABOUT THIS PROXY MATERIAL AND VOTING
 
Why am I receiving these materials?
 
We sent you this Proxy Statement and the enclosed proxy card because the Board of Directors of Vanda Pharmaceuticals Inc. (sometimes referred to as the “Company” or “Vanda”) is soliciting your proxy to vote at the 2007 Annual Meeting of Stockholders (the “Annual Meeting”). You are invited to attend the Annual Meeting to vote on the proposals described in this Proxy Statement. However, you do not need to attend the meeting to vote your shares. Instead, you may simply complete, sign and return the enclosed proxy card.
 
The Company intends to mail this Proxy Statement and accompanying proxy card on or about April 12, 2007 to all stockholders of record entitled to vote at the Annual Meeting.
 
Who can vote at the Annual Meeting?
 
Only stockholders of record at the close of business on April 5, 2007 will be entitled to vote at the Annual Meeting. On this record date, there were 26,564,979 shares of Company common stock (“Common Stock”) outstanding. All of these outstanding shares are entitled to vote at the Annual Meeting (one vote per share of Common Stock) in connection with the matters set forth in this Proxy Statement.
 
Stockholder of Record: Shares Registered in Your Name
 
If on April 5, 2007 your shares were registered directly in your name with our transfer agent, American Stock Transfer & Trust Company, then you are a stockholder of record. As a stockholder of record, you may vote in person at the meeting or vote by proxy. Whether or not you plan to attend the meeting, we urge you to fill out and return the enclosed proxy card as instructed below to ensure your vote is counted.
 
Beneficial Owner: Shares Registered in the Name of a Broker or Bank
 
If on April 5, 2007 your shares were held in an account at a brokerage firm, bank, dealer, or other similar organization, then you are the beneficial owner of shares held in “street name” and these proxy materials are being forwarded to you by that organization. The organization holding your account is considered the stockholder of record for purposes of voting at the Annual Meeting. As a beneficial owner, you have the right to direct your broker or other agent on how to vote the shares in your account. You are also invited to attend the Annual Meeting. However, since you are not the stockholder of record, you may not vote your shares in person at the meeting unless you request and obtain a valid proxy from your broker or other agent.
 
What am I voting on?
 
There are two matters scheduled for a vote:
 
  •  To elect Dr. James B. Tananbaum, Mr. David Ramsay and Mr. H. Thomas Watkins to the Board of Directors, to serve as Class I directors until the 2010 annual meeting of stockholders.
 
  •  To ratify the selection of PricewaterhouseCoopers LLP as our independent registered public accounting firm for the year ending December 31, 2007.


 

 
How do I vote?
 
The procedures for voting are fairly simple.
 
Stockholder of Record: Shares Registered in Your Name
 
If you are a stockholder of record, you may vote in person at the Annual Meeting or vote by proxy using the enclosed proxy card. You may vote in person at the Annual Meeting only if you bring a form of personal picture identification with you. You may deliver your completed proxy card in person or you may vote by completing a ballot, which will be available at the meeting. Whether or not you plan to attend the meeting, we urge you to vote by proxy to ensure your vote is counted.
 
To vote using the proxy card, simply complete, sign and date the enclosed proxy card and return it promptly in the envelope provided. If you return your signed proxy card to us before the Annual Meeting, we will vote your shares as you direct.
 
Beneficial Owner: Shares Registered in the Name of Broker or Bank
 
If you are a beneficial owner of shares registered in the name of your broker, bank, or other organization, you should have received instructions for granting proxies with these proxy materials from that organization rather than from the Company. A number of brokers and banks participate in a program provided through ADP Investor Communication Services, which enables beneficial holders to grant proxies to vote shares via telephone or the Internet. If your shares are held by a broker or bank that participates in the ADP Investor Communication Services program, you may grant a proxy to vote those shares telephonically by calling the telephone number on the instructions received from your broker or bank, or via the Internet at ADP Investor Communication Services’ website at www.proxyvote.com. To vote in person at the Annual Meeting, you must obtain a valid proxy from your broker, bank, or other organization. Follow the instructions from your broker, bank or other organization included with these proxy materials, or contact your broker, bank or other organization to request a proxy form.
 
How many votes do I have?
 
On each matter to be voted upon, you have one vote for each share of Common Stock you own as of April 5, 2007.
 
What vote is required to approve each matter?
 
  •  For the election of directors, the three nominees receiving the most “For” votes (among votes properly cast in person or by proxy) will be elected. Broker non-votes, as described below, will have no effect.
 
  •  To ratify the selection by the Audit Committee of the Board of Directors of PricewaterhouseCoopers LLP as the independent registered public accounting firm of the Company for the year ending December 31, 2007, the Company must receive a “For” vote from the majority of all those outstanding shares that are present in person or represented by proxy at the Annual Meeting and entitled to vote thereon either in person or by proxy. If you “Abstain” from voting, it will have the same effect as an “Against” vote. Broker non-votes, as described below, will have no effect.
 
What if I return a proxy card but do not make specific choices?
 
If you return a signed and dated proxy card without marking any voting selections, your shares will be voted “For” the election of Dr. James B. Tananbaum, Mr. David Ramsay and Mr. H. Thomas Watkins as Class I directors, and “For” the ratification of PricewaterhouseCoopers LLP as our independent registered public accounting firm. If any other matter is properly presented at the meeting, your proxy (one of the individuals named on your proxy card) will vote your shares using his or her best judgment.


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Who is paying for this proxy solicitation?
 
We will pay for the entire cost of soliciting proxies. In addition to these mailed proxy materials, our directors and employees may also solicit proxies in person, by telephone, or by other means of communication. Directors and employees will not be paid any additional compensation for soliciting proxies. We may reimburse brokerage firms, banks and other agents for the cost of forwarding proxy materials to beneficial owners.
 
What does it mean if I receive more than one proxy card?
 
If you receive more than one proxy card, your shares are registered in more than one name or are registered in different accounts. Please complete, sign and return each proxy card to ensure that all of your shares are voted.
 
Can I change my vote after submitting my proxy?
 
Yes. You can revoke your proxy at any time before the final vote at the meeting. You may revoke your proxy in any one of three ways:
 
  •  You may submit another properly completed proxy card with a later date.
 
  •  You may send a written notice that you are revoking your proxy to the Secretary of the Company at 9605 Medical Center Drive, Suite 300, Rockville, Maryland 20850.
 
  •  You may attend the Annual Meeting and vote in person. Simply attending the meeting will not, by itself, revoke your proxy.
 
How are votes counted?
 
Votes will be counted by the inspector of election appointed for the meeting, who will separately count “For” and “Against” votes, abstentions and broker non-votes. Abstentions will be counted towards the vote total for each proposal, and will have the same effect as “Against” votes. Note that “Against” votes and abstentions do not count toward the election of Class I directors — only votes “For” a director will be counted (with the three nominees receiving the most “For” votes being elected). Broker non-votes, as described in the next paragraph, have no effect and will not be counted towards the vote total for any proposal.
 
If your shares are held by your broker as your nominee (that is, in “street name”), you will need to obtain a proxy form from the institution that holds your shares and follow the instructions included on that form regarding how to instruct your broker to vote your shares. The broker may not vote the shares held in its name in its discretion on any of the matters presented at the annual meeting unless it receives voting instructions from you with respect to these matters. Any matter presented at the annual meeting with respect to which a broker, bank or other nominee does not have voting instructions from you will be counted for determining the quorum at the meeting, but will be considered as not voting on a particular matter.
 
What is the quorum requirement?
 
A quorum of stockholders is necessary to hold a valid meeting. A quorum will be present if a majority of all outstanding shares is represented by stockholders present at the meeting or by proxy. On the record date, there were 26,564,979 shares of Common Stock outstanding and entitled to vote. Thus 13,282,490 shares must be represented by stockholders present at the meeting or by proxy to have a quorum.
 
Your shares will be counted towards the quorum only if you submit a valid proxy vote or vote at the meeting. Abstentions and broker non-votes will be counted towards the quorum requirement.
 
Could other matters be decided at the Annual Meeting?
 
Vanda does not know of any other matters that may be presented for action at the Annual Meeting. Should any other business come before the meeting, the persons named on the enclosed proxy will have discretionary authority to vote the shares represented by such proxies in accordance with their best judgment. If you hold shares through a


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broker, bank or other nominee as described above, they will not be able to vote your shares on any other business that comes before the Annual Meeting unless they receive instructions from you with respect to such matter.
 
How can I find out the results of the voting at the Annual Meeting?
 
Preliminary voting results will be announced at the Annual Meeting. Final voting results will be published in our quarterly report on Form 10-Q for the second quarter of 2007.
 
When are stockholder proposals due for next year’s Annual Meeting?
 
If you wish to submit a proposal to be considered for inclusion in next year’s proxy materials or nominate a director, your proposal must be in proper form according to SEC Regulation 14A, Rule 14a-8, and received by the Secretary of the Company on or before December 12, 2007. If you wish submit a proposal to be presented at the 2008 Annual Meeting of Stockholders that will not be included in the Company’s proxy materials, your proposal must be submitted in writing and in conformance with our Bylaws to Vanda Pharmaceuticals Inc., 9605 Medical Center Drive, Suite 300, Rockville, MD 20850 Attn: Secretary, no earlier than January 26, 2008 and no later than February 25, 2008. You are advised to review our Bylaws, which contain additional requirements about advance notice of stockholder proposals and director nominations. Our current Bylaws may be found on our website at www.vandapharma.com.
 
PROPOSAL 1
 
 
ELECTION OF DIRECTORS
 
 
In accordance with Delaware law and our Bylaws, our Board of Directors is divided into three classes of approximately equal size. The members of each class are elected to serve a 3-year term with the term of office of each class ending in successive years. Pursuant to the Bylaws, the Board of Directors has fixed the number of directors at seven (7). James Tananbaum, M.D., David Ramsay and H. Thomas Watkins are the directors whose terms expire at this Annual Meeting. Dr. Tananbaum, Mr. Ramsay and Mr. Watkins have been nominated for election and to serve until the 2010 Annual Meeting or until their successors are elected (or until the director’s death, resignation or removal). It is our policy to encourage nominees for director to attend the Annual Meeting. The nominees for election to the Board of Directors, their ages as of April 5, 2007, and certain biographical information are set forth below.
 
Directors are elected by a plurality of the votes properly cast in person or by proxy. The three nominees receiving the highest number of “For” votes will be elected. Shares represented by executed proxies will be voted, if authority to do so is not withheld, for the election of each of the three nominees named below. If any nominee becomes unavailable for election as a result of an unexpected occurrence, your shares will be voted for the election of a substitute nominee proposed by our current Board of Directors, if any. Each person nominated for election has agreed to serve if elected. We have no reason to believe that any nominee will be unable to serve.
 
Nominees
 
             
Name
 
Age
 
Positions and offices held with the Company
 
James B. Tananbaum, M.D., Ph.D. 
  43   Director
David Ramsay
  43   Director
H. Thomas Watkins
  54   Director
 
THE BOARD OF DIRECTORS RECOMMENDS
A VOTE IN FAVOR OF EACH NAMED NOMINEE.


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Independence of the Board of Directors
 
As required under the Nasdaq Stock Market (“Nasdaq”) listing standards, a majority of the members of a listed company’s Board of Directors must qualify as “independent,” as affirmatively determined by the Board of Directors. Consistent with these considerations, after review of all relevant transactions or relationships between each director, or any of his or her family members, and the Company, its senior management and its independent auditors, the Board of Directors has determined that all of our directors are independent directors within the meaning of applicable Nasdaq listing standards, except for Dr. Mihael H. Polymeropoulos. Additionally, Dr. Wayne Hockmeyer, who served as a director of the Company until September, 2006, met the definition of independence during his time as director.
 
Information Regarding the Board of Directors and its Committees
 
As required under Nasdaq listing standards, our independent directors meet in regularly scheduled executive sessions at which only independent directors are present. Dr. Argeris N. Karabelas, Chairman of the Board of Directors, presides over these executive sessions. Stockholders interested in communicating with the independent directors regarding their concerns or issues may address correspondence to a particular director, or to the independent directors generally, in care of Vanda Pharmaceuticals Inc. at 9605 Medical Center Drive, Suite 300, Rockville, Maryland 20850, Attn: Secretary. The Secretary has the authority to disregard any inappropriate communications or to take other appropriate actions with respect to any inappropriate communications. If deemed an appropriate communication, the Secretary will forward it, depending on the subject matter, to the chairperson of a committee of the Board of Directors or a particular director, as appropriate.
 
The Board of Directors has an Audit Committee, a Compensation Committee and a Nominating/Corporate Governance Committee. The following table provides membership and meeting information for each of the Board committees during 2006:
 
                         
                Nominating/Corporate
 
Name
  Audit     Compensation     Governance  
 
Dr. Argeris N. Karabelas
            X (1)     X  
Richard W. Dugan
    X (1)                
Brian K. Halak, Ph.D. 
    X               X (1)
Wayne T. Hockmeyer, Ph.D.(2)
            X       X  
Mihael H. Polymeropoulos, M.D.
                       
David Ramsay
    X                  
James B. Tananbaum, M.D. 
            X          
H. Thomas Watkins(3)
            X       X  
Total meetings in 2006
    8       5       1  
 
 
(1) Committee Chairperson.
 
(2) Resigned from the Board of Directors, Compensation Committee and Nominating/Corporate Governance Committee effective September 12, 2006.
 
(3) Was appointed to the Board of Directors, Compensation Committee and Nominating/Corporate Governance Committee effective September 12, 2006.
 
Below is a description of each committee of the Board of Directors. The Board of Directors has determined that each member of the Audit, Compensation and Nominating/Corporate Governance Committees meets applicable rules and regulations regarding “independence” and that each such member is free of any relationship that would interfere with his individual exercise of independent judgment with regard to the Company.
 
Audit Committee
 
The Audit Committee of the Board of Directors oversees the integrity of the Company’s financial statements and other financial information provided to the Company’s stockholders, the retention of performance of the


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Company’s independent accountants, the Company’s internal controls and disclosure controls, and the Company’s compliance with ethics policies and SEC and related regulatory requirements. For these purposes, the Audit Committee, among other duties and powers, (1) approves audit fees for, and appoints and reviews the performance of, the Company’s independent accountants, (2) reviews reports prepared by management, and attested by the Company’s independent accountants, assessing the adequacy and effectiveness of the Company’s internal controls and procedures, prior to the inclusion of such reports in the Company’s periodic filings as required under the rules of the SEC, (3) reviews the Company’s annual and quarterly reports, and associated consolidated financial statements, with management and the independent accountants prior to the first public release of the Company’s financial results for such year or quarter, (4) reviews with external counsel any legal matters that could have a significant impact on the Company’s financial statements, (5) establishes and maintains procedures for the receipt, retention and treatment of complaints received by the Company regarding accounting, internal accounting controls and auditing matters and business conduct or ethics violations, and (6) reviews the Company’s compliance with its Code of Business Conduct and Ethics. Our Audit Committee charter can be found in the corporate governance section of our corporate website at www.vandapharma.com. Three directors comprise the Audit Committee: Mr. Dugan (the Chairman of the Audit Committee), Mr. Ramsay and Dr. Halak. The Audit Committee met eight times during 2006.
 
The Board of Directors annually reviews the Nasdaq listing standards definition of independence for Audit Committee members and has determined that all members of our Audit Committee are independent (as independence is currently defined in applicable Nasdaq listing standards and Rule 10A-3 under the Securities Exchange Act of 1934).
 
Compensation Committee
 
The Compensation Committee of the Board of Directors reviews and approves the design of, assesses the effectiveness of, and administers executive compensation programs, including the Company’s 2006 Equity Incentive Plan. For these purposes, the Compensation Committee, among other duties and powers, (1) reviews and approves corporate goals and objectives relevant to the compensation of the Chief Executive Officer and other Company executives, (2) reviews and approves the terms of offer letters, employment agreements, severance agreements, change-in-control agreements, and other material agreements between the Company and its executive officers, (3) approves material changes to the Company’s 401(k) plan and oversees its implementation, (4) reviews and approves the Compensation Discussion and Analysis included in this Proxy Statement, and (5) conducts reviews of executive officer succession planning. Our Compensation Committee Charter can be found in the corporate governance section of our website at www.vandapharma.com. Three directors comprise the Compensation Committee of the Board of Directors: Dr. Karabelas (the Chair of the Compensation Committee), Dr. Tananbaum and Mr. Watkins. Dr. Wayne Hockmeyer served on the Compensation Committee until September 2006, when Mr. Watkins was appointed. The Compensation Committee met five times during 2006.
 
The Board of Directors has determined that all members of the Compensation Committee are independent (as independence is currently defined in the Nasdaq listing standards). Additionally, Dr. Hockmeyer met the definition of independence during his tenure on the Compensation Committee.
 
Dr. Polymeropoulos, our Chief Executive Officer, does not participate in the determination of his own compensation or the compensation of directors. However, Dr. Polymeropoulos does make recommendations to the Compensation Committee regarding the amount and form of the compensation of the other executive officers and key employees, and he often participates in the Compensation Committee’s deliberations about their compensation. No other executive officers participate in the determination of the amount or form of the compensation of executive officers or directors.
 
The Compensation Committee retained Towers Perrin as its independent compensation consultant in November 2006. The consultant serves at the pleasure of the Compensation Committee rather than the Company and the consultant’s fees are approved by the Compensation Committee. Towers Perrin provides the Compensation Committee with data about the compensation paid by our peer group of companies and other employers who compete with the Company for executives, updates the Compensation Committee on new developments in areas that fall within the Compensation Committee’s jurisdiction and is available to advise the Compensation Committee


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regarding all of its responsibilities. Towers Perrin also provides data and recommendations concerning the compensation of directors.
 
Compensation Committee Interlocks and Insider Participation
 
None of the members of the Compensation Committee was at any time during 2006 an officer or employee of the Company. No executive officer of the Company serves as a member of the board of directors or compensation committee of any other entity that has one or more executive officers serving as a member of our Board of Directors or our Compensation Committee.
 
Nominating/Corporate Governance Committee
 
Our Nominating/Corporate Governance Committee identifies, evaluates and recommends nominees to our Board of Directors and committees of our Board of Directors, conducts searches for appropriate directors, and evaluates the performance of our Board of Directors and of individual directors. Our Nominating/Corporate Governance Committee is also responsible for reviewing development in corporate governance practices, evaluating the adequacy of our corporate governance practices and reporting and making recommendations to the Board of Directors concerning corporate governance matters. Our Nominating/Corporate Governance Committee charter can be found in the corporate governance section of our corporate website at www.vandapharma.com. Three directors comprise the Nominating/Corporate Governance Committee: Dr. Halak (the Chair of the Nominating/Governance Committee), Dr. Karabelas and Mr. Watkins. Dr. Wayne Hockmeyer served on the Nominating/Corporate Governance Committee until September 2006, when Mr. Watkins was appointed. All members of the Nominating/Corporate Governance Committee are independent (as independence is currently defined in the Nasdaq listing standards). The Nominating/Corporate Governance Committee met once during 2006. Additionally, Dr. Hockmeyer met the definition of independence during his tenure on the Nominating/Corporate Governance Committee.
 
The Nominating/Corporate Governance Committee believes that candidates for director should have certain minimum qualifications, including being able to read and understand basic financial statements and having a general understanding of the Company’s industry. The Nominating/Corporate Governance Committee also considers such factors as having relevant expertise upon which to be able to offer advice and guidance to management, having sufficient time to devote to the affairs of the Company, the candidate’s excellence in his or her field, the candidate’s ability to exercise sound business judgment and his or her commitment to vigorously represent the long-term interests of our stockholders, and other factors that the Nominating/Corporate Governance Committee deems appropriate. Candidates for director nominees are reviewed in the context of the current composition of the Board of Directors, the operating requirements of the Company and the long-term interests of our stockholders. In conducting this assessment, the Committee considers diversity, age, skills, and such other factors as it deems appropriate given the then-current needs of the Board of Directors and the Company, to maintain a balance of knowledge, experience and capability. In the case of incumbent directors whose terms of office are set to expire, the Nominating/Corporate Governance Committee reviews such directors’ overall service to the Company during their term, including the number of meetings attended, level of participation, quality of performance, and any other relationships and transactions that might impair such directors’ independence. In the case of new director candidates, the committee also determines whether the nominee is independent (or is required to be independent) for Nasdaq purposes, which determination is based upon applicable Nasdaq listing standards, applicable SEC rules and regulations and the advice of counsel, if necessary. The Nominating/Corporate Governance committee then uses its network of contacts to compile a list of potential candidates, but may also engage, if it deems it appropriate, a professional search firm. The Nominating/Corporate Governance Committee conducts any appropriate and necessary inquiries into the backgrounds and qualifications of possible candidates after considering the function and needs of the Board of Directors. The Committee meets to discuss and consider such candidates’ qualifications and then selects a nominee for recommendation to the Board of Directors by majority vote.
 
The Nominating/Corporate Governance Committee will consider director candidates recommended by stockholders and evaluate them using the same criteria as candidates identified by the Board of Directors or the Nominating/Corporate Governance Committee for consideration. If a stockholder of the Company wishes to recommend a director candidate for consideration by the Nominating/Corporate Governance Committee, the


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stockholder recommendation should be delivered to the Secretary of the Company at the principal executive offices of the Company and must include the candidate’s name and qualifications for board membership, the candidate’s age, business address, residence address, principal occupation or employment, the number of Company shares beneficially owned by the candidate and information that would be required to solicit a proxy under federal securities law. In addition, the recommendation must include the stockholder’s name, address and the number of Company shares beneficially owned by the stockholder.
 
Meetings of the Board of Directors
 
The Board of Directors met twelve times during 2006. Each director attended at least 75% or more of the aggregate of the meetings of the Board of Directors and of the committees on which he served, held during the period for which he was a director or committee member.
 
Stockholder Communications with the Board of Directors
 
Stockholders may communicate with the Board of Directors by sending a letter to the Secretary, Vanda Pharmaceuticals Inc., 9605 Medical Center Drive, Suite 300, Rockville, Maryland 20850. Each such communication should set forth (i) the name and address of such stockholder, as they appear on the Company’s books and, if the shares of the Company’s stock are held by a nominee, the name and address of the beneficial owner of such shares, and (ii) the number of shares of the Company’s stock that are owned of record by such record holder and beneficially by such beneficial owner. The Secretary will review all communications from stockholders, but may, in his sole discretion, disregard any communication that he believes is not related to the duties and responsibilities of the Board of Directors. If deemed an appropriate communication, the Secretary will submit a stockholder communication to a chairperson of a committee of the Board of Directors, or a particular director, as appropriate.
 
Code of Business Conduct and Ethics
 
The Company has adopted the Vanda Pharmaceuticals Inc. Code of Business Conduct and Ethics that applies to all directors, officers and employees. The Company has also adopted an additional Code of Ethics for its Chief Executive Officer and Senior Financial Officers. Both of these codes are available on our website at www.vandapharma.com. If the Company makes any substantive amendments to either of these codes or grants any waiver from a provision of either code to any applicable executive officer or director, the Company will promptly disclose the nature of the amendment or waiver on its website.
 
Compensation of Directors
 
On December 19, 2005, our Board of Directors adopted a compensation program for outside directors. Pursuant to this program, each member of our Board of Directors who is not our employee receives a $25,000 annual fee as well as $2,500 for each board meeting attended in person ($1,250 for meetings attended by telephone). The Chairman of the Board of Directors receives an additional annual fee of $10,000, and the chairman of each committee of the Board of Directors receives an additional annual fee of $2,000. Each director receives $1,000 for each meeting of any committee of the Board of Directors attended in person or by telephone.
 
Under the director compensation program adopted on December 19, 2005, each member of our Board of Directors who is not our employee and who is elected after December 19, 2005 initially receives a nonstatutory option to purchase 35,000 shares of our Common Stock upon election, and each member of our Board of Directors who is not our employee will also receive, upon the conclusion of each annual meeting of our stockholders, an option to purchase 15,000 shares of our Common Stock. The stock option granted upon election vests and becomes exercisable in equal monthly installments over a period of four years from the date of the grant, except that in the event of a change of control the option will accelerate and become immediately exercisable. Each annual stock option vests and becomes exercisable in equal monthly installments over a period of one year from the date of grant, except that in the event of a change of control the option will accelerate and become immediately exercisable. All of these options have an exercise price equal to the fair market value of our Common Stock on the date of the grant. In cases where a director is serving as such on behalf of an entity, we may issue a warrant directly to such entity as consideration for the services provided in lieu of granting an option to the director himself.


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2006 Director Compensation
 
The following table shows the compensation earned by each of our non-officer directors for the year ended December 31, 2006:
 
                         
    Fees earned or paid
             
Name
  in cash ($)     Option awards ($)(4)     Total ($)  
 
Argeris N. Karabelas, Ph.D. (Chairman)(1)
  $ 56,750     $     $ 56,750  
Richard W. Dugan
    52,500       37,622 (5)     90,122  
Brian K. Halak, Ph.D.(1)
    58,250             58,250  
Wayne T. Hockmeyer, Ph.D.(1)(2)
    37,750             37,750  
David A. Ramsay(1)
    51,500             51,500  
James B. Tananbaum, M.D.(1)
    43,500             43,500  
H. Thomas Watkins(3)
    27,417       34,166 (6)     61,583  
 
 
(1) Fees earned by Dr. Karabelas, Dr. Halak, Dr. Hockmeyer, Mr. Ramsay and Dr. Tananbaum were paid to the management companies of the venture capital funds affiliated with these directors.
 
(2) Dr. Hockmeyer resigned from our Board of Directors effective September 12, 2006.
 
(3) Mr. Watkins was appointed to our Board of Directors effective September 12, 2006.
 
(4) This column reflects the compensation cost for the year ended December 31, 2006 of each director’s options, calculated in accordance with SFAS 123(R) and using a Black-Scholes valuation model. See the consolidated financial statements included in our annual report on Form 10-K for a discussion of assumptions made by the Company in determining the grant date fair value and compensation costs of our equity awards.
 
(5) As of December 31, 2006, Mr. Dugan held options to purchase an aggregate of 10,571 shares of our Common Stock, 2,642 shares of which were vested as of December 31, 2006.
 
(6) As of December 31, 2006, Mr. Watkins held options to purchase an aggregate of 35,000 shares of our Common Stock, 2,916 shares of which were vested as of December 31, 2006.
 
PROPOSAL 2
 
RATIFICATION OF SELECTION OF INDEPENDENT REGISTERED PUBLIC ACCOUNTING FIRM
 
The Audit Committee of the Board of Directors has selected PricewaterhouseCoopers LLP, independent registered public accounting firm, as our independent auditors for the year ending December 31, 2007 and has further directed that management submit the selection of independent auditors for ratification by the stockholders at the Annual Meeting. PricewaterhouseCoopers LLP has audited our financial statements since the inception of our operations in March 2003. Representatives of PricewaterhouseCoopers LLP are expected to be present at the Annual Meeting. They will have an opportunity to make a statement if they so desire and will be available to respond to appropriate questions.
 
Neither our Bylaws nor other governing documents or laws require stockholder ratification of the selection of PricewaterhouseCoopers LLP as our independent registered public accounting firm. However, the Board of Directors is submitting the selection of PricewaterhouseCoopers LLP to the stockholders for ratification as a matter of good corporate practice. If the stockholders fail to ratify the selection, the Audit Committee of the Board will reconsider whether or not to retain that firm. Even if the selection is ratified, the Audit Committee of the Board in its discretion may direct the appointment of different independent auditors at any time during the year if it determines that such a change would be in the best interests of the Company and its stockholders.
 
Holders of a majority of the shares present in person or represented by proxy and entitled to vote at the Annual Meeting will be required to vote “For” Proposal 2 in order to ratify the selection of PricewaterhouseCoopers LLP. Abstentions will be counted toward the tabulation of votes cast on proposals presented to the stockholders and will have the same effect as votes “Against” Proposal 2. Broker non-votes are counted towards a quorum, but are not counted for any purpose in determining whether this matter has been approved.


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Independent Registered Public Accounting Firm’s Fees
 
The following table represents aggregate fees billed to the Company for the years ended December 31, 2006 and December 31, 2005 by PricewaterhouseCoopers LLP, our principal accountant.
 
                 
    Year ended December 31,  
    2006     2005  
 
Audit fees(1)
  $ 196,947     $ 95,000  
Audit-related fees(2)
    186,413       361,915  
Tax fees
    9,325       8,413  
All other fees
           
                 
Total fees
  $ 392,685     $ 465,328  
 
 
(1) For professional services rendered for the audits of annual financial statements, including the audit of annual financial statements for the years ended December 31, 2006 and 2005. For the year 2006, the audit fees include the review of quarterly financial statements included in our quarterly reports on Form 10-Q.
 
(2) Audit-related services include services associated with our initial public offering completed on April 12, 2006, our follow-on offering on Form S-1 initially filed on December 19, 2006, and other regulatory filings.
 
All 2006 fees described above were pre-approved by the Audit Committee. The Audit Committee did not pre-approve the 2005 fees above, as the Company was not yet subject to the requirements of Regulation S-X under the Exchange Act.
 
Pre-Approval Policies and Procedures
 
The Audit Committee’s policy is to pre-approve all audit and permissible non-audit services rendered by PricewaterhouseCoopers LLP, our independent registered public accounting firm. The Audit Committee can pre-approve specified services in defined categories of audit services, audit-related services and tax services up to specified amounts, as part of the Audit Committee’s approval of the scope of the engagement of PricewaterhouseCoopers LLP or on an individual case-by-case basis before PricewaterhouseCoopers LLP is engaged to provide a service. The Audit Committee has determined that the rendering of tax-related services by PricewaterhouseCoopers LLP is compatible with maintaining the principal accountant’s independence for audit purposes. PricewaterhouseCoopers LLP has not been engaged to perform any non-audit services other than tax-related services.
 
 
THE BOARD OF DIRECTORS RECOMMENDS A VOTE IN FAVOR OF PROPOSAL 2.


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REPORT OF THE AUDIT COMMITTEE1
 
The Audit Committee of the Board of Directors consists of the three non-employee directors named below. The Board annually reviews the Nasdaq listing standards’ definition of independence for Audit Committee members (including the requirements of Exchange Act Rule 10A-3) and has determined that each member of the Audit Committee meets that standard. Mr. Dugan serves as an audit committee financial expert in accordance with applicable SEC regulations.
 
The principal purpose of the Audit Committee is to assist the Board of Directors in its general oversight of our accounting and financial reporting processes and audits of our consolidated financial statements. The Audit Committee is responsible for selecting and engaging our independent auditor and approving the audit and non-audit services to be provided by the independent auditor. The Audit Committee’s function is more fully described in its Charter, which the Board of Directors has adopted and which the Audit Committee reviews and approves on an annual basis.
 
Our management is responsible for preparing our consolidated financial statements and our financial reporting process. PricewaterhouseCoopers LLP, our independent registered public accounting firm, is responsible for performing an independent audit of our consolidated financial statements and expressing an opinion on the conformity of those consolidated financial statements with U.S. generally accepted accounting principles.
 
The Audit Committee has reviewed and discussed with our management the audited consolidated financial statements of the Company included in our Annual Report on Form 10-K for the year ended December 31, 2006 (the “10-K”).
 
The Audit Committee has also reviewed and discussed with PricewaterhouseCoopers LLP the audited consolidated financial statements in the 10-K. In addition, the Audit Committee discussed with Pricewater-houseCoopers LLP those matters required to be discussed by Statement on Auditing Standards No. 61, as amended. Additionally, PricewaterhouseCoopers LLP provided to the Audit Committee the written disclosures and the letter required by Independence Standards Board Standard No. 1, as adopted by the Public Company Accounting Oversight Board. The Audit Committee also discussed with PricewaterhouseCoopers LLP its independence from the Company.
 
Based upon the review and discussions described above, the Audit Committee recommended to the Board of Directors that the audited consolidated financial statements be included in the Company’s Annual Report on Form 10-K for year ended December 31, 2006 for filing with the United States Securities and Exchange Commission. We have selected PricewaterhouseCoopers LLP as the Company’s independent registered public accounting firm for the year ended December 31, 2007, and have approved submitting the selection of the independent registered public accounting firm for ratification by the stockholders.
 
Submitted by the following members of the Audit Committee:
 
Richard W. Dugan, Chairman
Brian K. Halak, Ph.D.
David Ramsay
 
 
1 The material in this report is not “soliciting material,” is not deemed “filed” with the SEC and is not to be incorporated by reference in any filing of Vanda under the Securities Act or the Exchange Act, whether made before or after the date hereof and irrespective of any general incorporation language in any such filing.


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EXECUTIVE OFFICERS
 
The names of the executive officers and directors of Vanda and certain information about each of them as of April 5, 2007 are set forth below:
 
Mihael H. Polymeropoulos, M.D., age 47, has served as Chief Executive Officer and a Director of Vanda since May of 2003. Prior to joining Vanda, Dr. Polymeropoulos was Vice President and Head of the Pharmacogenetics Department at Novartis AG from 1998 to 2003. Prior to his tenure at Novartis, he served as Chief of the Gene Mapping Section, Laboratory of Genetic Disease Research, National Human Genome Research Institute, from 1992 to 1998. Dr. Polymeropoulos is the co-founder of the Integrated Molecular Analysis of Genome Expression (IMAGE) Consortium. Dr. Polymeropoulos holds a degree in Medicine from the University of Patras.
 
Paolo Baroldi, M.D., Ph.D., age 56, has served as a Senior Vice President and Chief Medical Officer at Vanda since July 2006. Prior to joining Vanda, Dr. Baroldi served as Vice President — Corporate Drug Development at Chiesi Farmaceutici SpA, in Parma, Italy, from 2003 to 2006. Prior to his tenure at Chiesi, Dr. Baroldi was the Global Head of Clinical Pharmacology at Novartis AG from 1998 to 2002. Dr. Baroldi holds degrees in Medicine and Surgery and a Ph.D. in Clinical Pharmacology from the University of Milan, and an Executive Masters in Business Administration from Harvard University.
 
William D. “Chip” Clark, age 38, has served as Senior Vice President and Chief Business Officer of Vanda since September of 2004 and served as a Director of Vanda from 2003 to 2004. Prior to joining Vanda, Mr. Clark was a Principal at Care Capital, LLC, a venture capital firm investing in biopharmaceutical companies, from 2000 to 2004. Prior to his tenure at Care Capital, he served in a variety of commercial roles at SmithKline Beecham (now part of GlaxoSmithKline), from 1990 to 2000. Mr. Clark holds a B.A. from Harvard University and an M.B.A. from The Wharton School at the University of Pennsylvania.
 
Steven A. Shallcross, age 45, has served as Senior Vice President, Chief Financial Officer and Treasurer of Vanda since November of 2005. From October 2001 to November 2005, Mr. Shallcross was the Senior Vice President, Chief Financial Officer and Treasurer at Advancis Pharmaceutical Corporation, a specialty pharmaceutical company. Mr. Shallcross was the Vice President of Finance and Chief Financial Officer at Bering Truck Corporation, a truck manufacturer, from 1997 to 2001. From 1994 to 1997, Mr. Shallcross served as Vice President of Operations at Precision Scientific, Inc., a manufacturer of scientific laboratory equipment. He was the Controller of Precision Scientific from 1993 to 1994. Mr. Shallcross has over 20 years of senior financial and operations experience in emerging organizations, including acquisitions and restructurings. Mr. Shallcross received a bachelor’s degree in accounting from the University of Illinois and an M.B.A. from the University of Chicago, Graduate School of Business. Mr. Shallcross is also a certified public accountant.
 
Thomas Copmann, Ph.D., age 54, has served as Vice President of Regulatory Affairs at Vanda since April of 2005. Prior to joining Vanda, Dr. Copmann served as Senior Director of Regulatory Affairs at Eli Lilly, from 2000 to 2005 and as a Director from 1995 to 2000. Prior to his tenure at Eli Lilly, Dr. Copmann was the Associate Vice President for Regulatory Affairs and Executive Director for the Commission on Drugs for Rare Diseases at the Pharmaceutical Manufacturers Association, from 1989 to 1995. Dr. Copmann holds an M.S. in Endocrinology and a Ph.D. in Physiology from Kent State University.
 
Deepak Phadke, Ph.D., age 56, has served as Vice President of Manufacturing at Vanda since August of 2005. Prior to joining Vanda, Dr. Phadke served as Executive Director of Pharmaceutical Sciences at Beckloff Associates, a pharmaceutical research and development consulting company located in the Kansas City area, from 1998 to 2005. Prior to his tenure at Beckloff Associates, Dr. Phadke served as a manager and research scientist in the formulation development departments at Hoechst Marion Roussel and its predecessor companies in Kansas City and Indianapolis, from 1986 to 1998. Dr. Phadke also worked as a senior pharmaceutical chemist at Rorer Group Inc. in Fort Washington, Pennsylvania from 1983 to 1986. Dr. Phadke holds a B.S. and an M.S. in Pharmacy and Pharmaceutics, respectively, from Nagpur University in India, and a Ph.D. in Pharmaceutics from Rutgers University.
 
Argeris N. Karabelas, Ph.D., age 54, has served as a Director and Chairman of the Board since 2003, when he co-founded Vanda with Dr. Polymeropoulos. Dr. Karabelas has served as a Partner of Care Capital, LLC since 2001. Prior to his tenure at Care Capital, Dr. Karabelas was the Founder and Chairman of the Novartis BioVenture Fund,


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from July 2000 to December 2001. From 1998 to 2000, he served as Head of Healthcare and CEO of Worldwide Pharmaceuticals for Novartis. Prior to joining Novartis, Dr. Karabelas was Executive Vice President of SmithKline Beecham responsible for U.S. operations, European operations, Regulatory, and Strategic Marketing, from 1981 to 1998. He is a member of the Scientific Advisory Council of the Massachusetts General Hospital, the Harvard-MIT Health Science and Technology Visiting Committee, Chairman of Human Genome Sciences, Inc., Chairman of NitroMed, Inc., Chairman of SkyePharma plc, Chairman of Inotek, Inc., a director of Renovo, plc and a Trustee of Fox Chase Cancer Center and the Philadelphia University of the Sciences. Dr. Karabelas holds a Ph.D. in Pharmacokinetics from the Massachusetts College of Pharmacy.
 
Richard W. Dugan, age 65, has served as a Director of Vanda since December of 2005. From 1976 to September 2002, Mr. Dugan served as a Partner with Ernst & Young, LLP, where he served in a variety of managing and senior partner positions, including Mid-Atlantic Area Senior Partner from 2001 to 2002, Mid-Atlantic Area Managing Partner from 1989 to 2001 and Pittsburgh Office Managing Partner from 1979 to 1989. Mr. Dugan retired from Ernst & Young, LLP in September 2002. Mr. Dugan currently serves on the board of directors of two other publicly-traded pharmaceutical companies, Advancis Pharmaceutical Corporation and Critical Therapeutics, Inc. and on the board of directors of a privately-owned pharmaceutical company, Xanthus Pharmaceuticals, Inc. Mr. Dugan holds a B.S.B.A. from Pennsylvania State University.
 
Brian K. Halak, Ph.D., age 35, has served as a Director of Vanda since 2004. Dr. Halak has served as a Principal at Domain Associates, a venture capital firm based in Princeton, New Jersey, since 2001 and became a Partner in January 2006. Prior to joining Domain Associates, he served as an Associate of the venture capital firm Advanced Technology Ventures, from 2000 to 2001. Dr. Halak serves on the Investment Advisory Council for Ben Franklin Technology Partners and BioAdvance, both seed stage investment groups in Philadelphia. Dr. Halak holds a B.S.E. from the University of Pennsylvania and a Ph.D. in Immunology from Thomas Jefferson University.
 
H. Thomas Watkins, age 54, has served as a Director of Vanda since September 2006. Mr. Watkins has served as the President and Chief Executive Officer of Human Genome Sciences, Inc. and as a member of its board of directors since 2004. Prior to his tenure at Human Genome Sciences Inc., Mr. Watkins served as President of TAP Pharmaceutical Products, Inc. Mr. Watkins previously held a series of executive positions over the course of nearly twenty years with Abbott Laboratories. Mr. Watkins also serves on the Board of Trustees of the College of William and Mary Foundation, and is a member of the College of William and Mary Mason School of Business Foundation. He holds a bachelor’s degree from the College of William and Mary, and a master’s degree in business administration from the University of Chicago Graduate School of Business.
 
David Ramsay, age 43, has served as a Director of Vanda since 2004. Mr. Ramsay has served as a Partner of Care Capital, LLC, which he co-founded in 2000. Prior to founding Care Capital, Mr. Ramsay served as a Managing Director of the Rhône Group, LLC, from 1997 to 2000 and co-founded Rhône Capital, LLC, a private equity investment fund. Mr. Ramsay previously worked at Morgan Stanley Capital Partners. Mr. Ramsay holds an A.B. in Mathematics from Princeton University and an M.B.A. from the Stanford University Graduate School of Business.
 
James B. Tananbaum, M.D., age 43, has served as a Director of Vanda since 2004. Dr. Tananbaum has served as a Managing Partner of Prospect Venture Partners II, a dedicated life science venture fund group which he co-founded in 2000. Prior to co-founding Prospect Venture Partners, he co-founded and served as Chief Executive Officer of Theravance, Inc. from 1997 to 2000. Dr. Tananbaum also served as a Partner at Sierra Ventures, from 1993 to 1997. Dr. Tananbaum co-founded GelTex Pharmaceuticals, Inc. in 1991. He is an officer of the Young Presidents’ Organization, Golden Gate Chapter and a member of the World Economic Forum and the Harvard-MIT Health Science and Technology Visiting Committee. Dr. Tananbaum serves as a director of numerous public and private healthcare companies, including Cogentus Pharmaceuticals, Inc., Jazz Pharmaceuticals, Inc., PathWorks, Inc. and Novavax, Inc. Dr. Tananbaum holds a bachelor’s degree and a B.S.E.E. from Yale University and an M.D. and an M.B.A. from Harvard University.


13


 

 
SECURITY OWNERSHIP OF CERTAIN BENEFICIAL OWNERS AND MANAGEMENT
 
The following table sets forth certain information known to us regarding beneficial ownership of our Common Stock as of March 26, 2007 by:
 
  •  each person known by us to be the beneficial owner of more than 5% of our any class of our voting securities;
 
  •  our named executive officers;
 
  •  each of our directors; and
 
  •  all executive officers and directors as a group.
 
Unless otherwise indicated, to our knowledge, each stockholder possesses sole voting and investment power over the shares listed, except for shares owned jointly with that person’s spouse. The table below is based upon information supplied by officers, directors and principal stockholders and Schedules 13G filed with the SEC.
 
Beneficial ownership is determined in accordance with the rules of the SEC and generally includes voting or investment power with respect to securities. Except as noted by footnote, and subject to community property laws where applicable, the persons named in the table below have sole voting and investment power with respect to all shares of Common Stock shown as beneficially owned by them.
 
Percentage of shares beneficially owned is based on 26,561,779 shares of Common Stock outstanding as of March 26, 2007.
 


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        Percentage of
    Number of shares
  shares beneficially
Name and address of beneficial owner(1)
  beneficially owned   owned
 
5% Stockholders
               
OppenheimerFunds, Inc.(2)
    3,955,996       14.89 %
Two World Financial Center
225 Liberty Street
New York, NY 10281
               
FMR Corp.(3)
    2,770,621       10.43 %
82 Devonshire Street
Boston, MA 02109
               
Versant Capital Management LLC(4)
    2,100,000       7.91 %
45 Rockefeller Plaza
Suite 2074
New York, NY 10111
               
Domain Partners VI, L.P.(5)
    1,995,976       7.51 %
One Palmer Square, Suite 515
Princeton, NJ 08542
               
Davidson Kempner Partners(6)
    1,701,539       6.41 %
65 East 55th Street, 19th Floor
New York, NY 10022
               
Steven A. Cohen(7)
    1,611,874       6.07 %
72 Cummings Point Road
Stanford, CT 06902
               
Executive Officers and Directors
               
Mihael H. Polymeropoulos, M.D.(8)
    282,405       1.05 %
Paolo Baroldi, M.D., Ph.D.(9)
    4,375       *  
William D. “Chip” Clark(10)
    161,388       *  
Steven A. Shallcross(11)
    39,853       *  
Argeris N. Karabelas, Ph.D.(12)
    1,000,000       3.76 %
Richard W. Dugan(13)
    3,524       *  
Brian K. Halak, Ph.D. 
           
H. Thomas Watkins(14)
    5,833       *  
David Ramsay(15)
    1,000,000       3.76 %
James B. Tananbaum, M.D.(16)
    736,077       *  
Deepak Phadke, Ph.D.(17)
    2,952       2.77 %
Thomas Copmann, Ph.D.(18)
    22,201       *  
All executive officers and directors as a group
    2,258,608       8.34 %
 
 
Represents beneficial ownership of less than one percent of our outstanding Common Stock.
 
(1) Unless otherwise indicated, the address for each beneficial owner is c/o Vanda Pharmaceuticals Inc., 9605 Medical Center Drive, Suite 300, Rockville, Maryland 20850.
 
(2) Based on Schedule 13G/A filed on March 9, 2007 by OppenheimerFunds, Inc., reporting holdings as a registered investment adviser under Section 203 of the Investment Advisers Act of 1940. The reporting person disclaims beneficial ownership as an investment adviser.
 
(3) Based on Schedule 13G filed on February 12, 2007 by FMR Corp. on behalf of itself, Edward C. Johnson 3d and Fidelity Management & Research Company (“Fidelity”). Fidelity, a wholly-owned subsidiary of FMR Corp. and an investment adviser registered under Section 203 of the Investment Advisers Act of 1940, beneficially owns the Company’s shares of Common Stock as a result of acting as investment adviser to various investment companies registered under Section 8 of the Investment Company Act of 1940. The

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ownership of one investment company, Fidelity Contrafund, amounted to 1,626,100 shares of Common Stock. Fidelity Contrafund has its principal business office at 82 Devonshire Street, Boston, Massachusetts 02109. Edward C. Johnson 3d and FMR Corp., through its control of Fidelity, and the funds each has sole power to dispose of the 2,770,621 shares owned by the Funds. Members of the family of Edward C. Johnson 3d, Chairman of FMR Corp., are the predominant owners, directly or through trusts, of Series B shares of common stock of FMR Corp., representing 49% of the voting power of FMR Corp. The Johnson family group and all other Series B shareholders have entered into a shareholders’ voting agreement under which all Series B shares will be voted in accordance with the majority vote of Series B shares. Accordingly, through their ownership of voting common stock and the execution of the shareholders’ voting agreement, members of the Johnson family may be deemed, under the Investment Company Act of 1940, to form a controlling group with respect to FMR Corp. Neither FMR Corp. nor Edward C. Johnson 3d, Chairman of FMR Corp., has the sole power to vote or direct the voting of the shares owned directly by the Fidelity Funds, which power resides with the Funds’ Boards of Trustees. Fidelity carries out the voting of the shares under written guidelines established by the Funds’ Boards of Trustees.
 
(4) Based on Schedule 13G/A filed by Versant Capital Management LLC and Herriot Tabuteau on January 25, 2007. Harriot Tabuteau is the managing member of Versant Capital Management LLC and so may be deemed to beneficially own such shares of Common Stock. Mr. Tabuteau disclaims such beneficial ownership.
 
(5) Includes 1,954,450 shares held of record by Domain Partners VI, L.P., 21,068 shares held of record by DP VI Associates, L.P. and 20,458 shares held of record by One Palmer Square Associates VI, L.L.C. Voting and/or dispositive decisions with respect to the shares held by Domain Partners VI, L.P. and DP VI Associates, L.P. are made by the managing members of their general partner, One Palmer Square Associates VI, L.L.C.— James C. Blair, Ph.D., Brian H. Dovey, Robert J. More, Kathleen K. Schoemaker, Jesse I. Treu, Ph.D. and Nicole Vitullo, each of whom disclaims beneficial ownership of such shares except to the extent of his or her pecuniary interest therein, the amount of which cannot currently be determined.
 
(6) Based on Schedule 13G/A filed jointly on February 14, 2006, reporting holdings as of December 31, 2006 by each of Davidson Kempner Partners, a New York limited partnership (“DKP”), Davidson Kempner Institutional Partners, L.P., a Delaware limited partnership (“DKIP”), M. H. Davidson & Co., a New York limited partnership (“CO”), Davidson Kempner International, Ltd., a British Virgin Islands corporation (“DKIL”), Serena Limited, a Cayman Islands corporation (“Serena”), Davidson Kempner Healthcare Fund LP, a Delaware limited partnership (“DKHF”), Davidson Kempner Healthcare International Ltd., a Cayman Islands corporation (“DKHI”), MHD Management Co., a New York limited partnership and the general partner of DKP (“MHD”), Davidson Kempner Advisers Inc., a New York corporation and the general partner of DKIP (“DKAI”), Davidson Kempner International Advisors, L.L.C., a Delaware limited liability company and the manager of DKIL and Serena (“DKIA”), DK Group LLC, a Delaware limited liability company and the general partner of DKHF (“DKG”), DK Management Partners LP, a Delaware limited partnership and the investment manager of DKHI (“DKMP”), DK Stillwater GP LLC, a Delaware limited liability company and the general partner of DKMP (“DKS”), and Messrs. Thomas L. Kempner, Jr., Marvin H. Davidson, Stephen M. Dowicz, Scott E. Davidson, Michael J. Leffell, Timothy I. Levart, Robert J. Brivio, Jr., Anthony A. Yoseloff, Eric P. Epstein and Avram Z. Friedman (collectively, the “Principals”), who are the general partners of CO and MHD, the sole managing members of DKIA and DKG and the sole stockholders of DKAI. Messrs. Thomas L. Kempner, Jr. and Timothy I. Levart are Executive Managing Member and Deputy Executive Managing Member, respectively, of DKS. Each of Messrs. Kempner and Levart, together with Messrs. Marvin H. Davidson, Stephen M. Dowicz, Scott E. Davidson, Michael J. Leffell, Robert J. Brivio, Jr., Anthony A. Yoseloff, Eric P. Epstein and Avram Z. Friedman are limited partners of DKMP. The Principals may be deemed to beneficially own an aggregate of 1,701,539 shares as a result of their voting and dispositive power over the 1,701,539 shares beneficially owned by DKP, DKIP, DKIL, Serena, CO, DKHF and DKHI. DKIA may be deemed to beneficially own the 265,435 shares beneficially owned by DKIL and the 6,636 shares beneficially owned by Serena as a result of its voting and dispositive power over those shares. DKAI may be deemed to beneficially own the 166,291 shares beneficially owned by DKIP as a result of its voting and dispositive power over those shares. MHD may be deemed to beneficially own the 101,580 shares beneficially owned by DKP as a result of its voting and dispositive power over those shares. DKG may be deemed to beneficially own the 605,963 shares beneficially owned by DKHF as a result of its voting and


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dispositive power over those shares. DKMP and DKS may be deemed to beneficially own the 544,277 shares beneficially owned by DKHI as a result of their voting and dispositive power over those shares.
 
(7) Based on Schedule 13G filed jointly on February 14, 2007, reporting holdings as of December 31, 2006 by each of (i) S.A.C. Capital Advisors, LLC, (“SAC Capital Advisors”), beneficially owned by S.A.C. Capital Associates, LLC (“SAC Capital Associates”) and S.A.C. MultiQuant Fund, LLC (“SAC MultiQuant”), (ii) S.A.C. Capital Management, LLC, (“SAC Capital Management”) with respect to shares beneficially owned by SAC Capital Associates and SAC MultiQuant, (iii) SAC Capital Associates with respect to shares beneficially owned by it, (iv) Sigma Capital Management, LLC (“Sigma Management”) with respect to shares beneficially owned by Sigma Capital Associates, LLC (“Sigma Capital Associates”), and (v) Steven A. Cohen with respect to shares beneficially owned by SAC Capital Advisors, SAC Capital Management, SAC Capital Associates, SAC MultiQuant, Sigma Management and Sigma Capital Associates. SAC Capital Advisors, SAC Capital Management, Sigma Management and Mr. Cohen do not directly own any shares. Pursuant to investment agreements, each of SAC Capital Advisors and SAC Capital Management share all investment and voting power with respect to the securities held by SAC Capital Associates and SAC MultiQuant. Pursuant to an investment management agreement, Sigma Management maintains investment and voting power with respect to the securities held by Sigma Capital Associates. Mr. Cohen controls each of SAC Capital Advisors, SAC Capital Management and Sigma Management. By reason of the provisions of Rule 13d-3 of the Securities Exchange Act of 1934, as amended, each of (i) SAC Capital Advisors, SAC Capital Management and Mr. Cohen may be deemed to own beneficially 1,502,274 shares; and (ii) Sigma Management and Mr. Cohen may be deemed to own beneficially an additional 109,600 shares. Each of SAC Capital Advisors, SAC Capital Management, Sigma Management and Mr. Cohen disclaim beneficial ownership of any shares.
 
(8) Excludes 901,743 shares subject to options that are not exercisable within 60 days of March 26, 2007.
 
(9) Excludes 161,052 shares subject to options that are not exercisable within 60 days of March 26, 2007.
 
(10) Excludes 436,869 shares subject to options that are not exercisable within 60 days of March 26, 2007.
 
(11) Excludes 186,314 shares subject to options that are not exercisable within 60 days of March 26, 2007.
 
(12) Includes 935,831 shares held of record by Care Capital Investments II, LP and 64,169 shares of record held by Care Capital Offshore Investments II, LP. Dr. Karabelas is a managing member of Care Capital II, LLC. Care Capital II, LLC is the general partner of Care Capital Investments II, LP and Care Capital Offshore Investments II, LP. Dr. Karabelas disclaims beneficial ownership of the shares held by Care Capital Investments II, LP and Care Capital Offshore Investments II, LP except to the extent of his pecuniary interest therein, the amount of which cannot currently be determined.
 
(13) Excludes 7,050 shares subject to options that are not exercisable within 60 days of March 26, 2007.
 
(14) Excludes 29,167 shares subject to options that are not exercisable within 60 days of March 26, 2007.
 
(15) Includes 935,831 shares held of record by Care Capital Investments II, LP and 64,169 shares held of record held by Care Capital Offshore Investments II, LP. Mr. Ramsay is a Partner of Care Capital, LLC. Care Capital, LLC is the general partner of Care Capital Investments II, LP and Care Capital Offshore Investments II, LP. Mr. Ramsay disclaims beneficial ownership of the shares held by Care Capital Investments II, LP and Care Capital Offshore Investments II, LP except to the extent of his pecuniary interest therein, the amount of which cannot currently be determined.
 
(16) Includes 725,036 shares held of record by Prospect Venture Partners II, L.P. and 11,041 shares held of record by Prospect Associates II, L.P. Dr. Tananbaum serves as a managing member of Prospect Management Co. II, L.L.C., the general partner of Prospect Venture Partners II, L.P. and Prospect Associates II, L.P. He disclaims beneficial ownership of the shares held of record by Prospect Venture Partners II, L.P. and Prospect Associates II, L.P. except to the extent of his pecuniary interest therein the amount of which cannot currently be determined. Also includes 2,303 shares held directly by Dr. Tananbaum.
 
(17) Excludes 50,357 shares subject to options that are not exercisable within 60 days of March 26, 2007.
 
(18) Excludes 18,148 shares subject to options that are not exercisable within 60 days of March 26, 2007. Includes 11,801 restricted shares which are subject to vesting restrictions within 60 days of March 26, 2007.


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BENEFICIAL OWNERSHIP REPORTING COMPLIANCE
 
Section 16(a) of the Exchange Act requires our directors, executive officers, and holders of more than 10% of our Common Stock to file reports regarding their ownership and changes in ownership of our securities with the SEC, and to furnish us with copies of all Section 16(a) reports that they file.
 
We believe that during the year ended December 31, 2006, our directors, executive officers, and greater than 10% stockholders complied with all applicable Section 16(a) filing requirements, except that one Form 4 was filed late, on January 2, 2007, with respect to a grant of options to Paolo Baroldi, M.D., our Chief Medical Officer, on December 13, 2006.
 
COMPENSATION OF EXECUTIVE OFFICERS
 
Compensation Discussion and Analysis
 
The following paragraphs discuss the principles underlying our executive compensation decisions and the most important factors relevant to an analysis of these decisions. It provides qualitative information regarding the manner and context in which compensation is awarded to and earned by our executive officers and places in perspective the data presented in the tables and other quantitative information that follows this section.
 
Our compensation of executives is designed to attract, as needed, individuals with the skills necessary for us to achieve our business plan, to reward those individuals fairly over time, and to retain those individuals who continue to perform at or above our expectations. Our executives’ compensation has three primary components — salary, a yearly cash incentive bonus, and stock option awards.
 
Base Salary.  We fix the base salary of each of our executives at a level we believe enables us to hire and retain individuals in a competitive environment and rewards satisfactory individual performance and a satisfactory level of contribution to our overall business goals. We also take into account the base salaries paid by similarly situated companies in the field of biotechnology and the base salaries of other private and public companies with which we believe we compete for talent. To this end, we subscribe to certain executive compensation surveys and other databases and review them when making a crucial executive hiring decision and annually when we review executive compensation
 
Cash Incentive Bonus.  We designed the cash incentive bonuses for each of our executives to focus him on achieving key clinical, operational and/or financial objectives within a yearly time horizon, as described in more detail below.
 
Stock Options.  We use stock options to reward long-term performance; these options are intended to produce significant value for each executive if the Company’s performance is outstanding and if the executive has an extended tenure.
 
We view our three primary components of our executive compensation as related but distinct. Although our Compensation Committee does review total compensation, we do not believe that significant compensation derived from one component of compensation should negate or reduce compensation from other components. We determine the appropriate level for each compensation component based in part, but not exclusively, on our view of internal equity and consistency, individual performance and other information we deem relevant, such as the survey data referred to above. We believe that, as is common in the biotechnology sector, stock option awards are the primary motivator in attracting and retaining executives, and that salary and cash incentive bonuses are secondary considerations. Except as described below, our Compensation Committee has not adopted any formal or informal policies or guidelines for allocating compensation between long-term and currently paid out compensation, between cash and non-cash compensation, or among different forms of compensation. This is due to the small size of our executive team and the need to tailor each executive’s award to attract and retain that executive.
 
In addition to the three primary components of compensation described above, we provide our executives with benefits that are generally available to our salaried employees. These benefits include health and medical benefits, flexible spending plans and matching 401(k) contributions. We also provide our executives with certain additional benefits in the event of a change of control of the Company, as described in more detail below.


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Our Compensation Committee’s current intent is to perform annually a strategic review of our executive officers’ cash compensation and share and option holdings to determine whether they provide adequate incentives and motivation to our executive officers and whether they adequately compensate our executive officers relative to comparable officers in other companies. Our Compensation Committee’s most recent review occurred in November 2006 and utilized a report from Towers Perrin, a well-known consulting firm specializing in executive compensation. This review is described in more detail below. Compensation Committee meetings typically have included, for all or a portion of each meeting, not only the committee members but also our President and Chief Executive Officer, our Chief Business Officer and our Chief Financial Officer. For compensation decisions, including decisions regarding the grant of equity compensation relating to executive officers (other than our President and Chief Executive Officer), the Compensation Committee typically considers the recommendations of our President and Chief Executive Officer.
 
We account for the equity compensation expense for our employees under the rules of SFAS 123R, which requires us to estimate and record an expense for each award of equity compensation over the service period of the award. Accounting rules also require us to record cash compensation as an expense at the time the obligation is accrued. Until we achieve sustained profitability, the availability to us of a tax deduction for compensation expense is not material to our financial position. We structure cash incentive bonus compensation so that it is taxable to our employees at the time it becomes available to them. It is not anticipated that any executive officer’s annual cash compensation will exceed $1 million, and the Company has accordingly not made an effort to qualify for any compensation deductions under Section 162(m) of the Internal Revenue Code with respect to cash compensation. Our option grants are designed to be exempt from the $1 million limit.
 
Benchmarking of Base Compensation and Equity Holdings
 
At its November 2006 meeting, our Compensation Committee determined that our executive officers’ salaries, cash incentive bonuses and equity holdings were at or near the median of executives with similar roles at comparable pre-public and recently public companies and that no material changes should be made to the compensation levels of our executive officers at that time, other than the grant of additional options made in December 2006 to Drs. Baroldi, Copmann and Phadke reflected in the “2006 grants of plan-based awards” table below. This median was derived based on a report we obtained from Towers Perrin. The report compared our executive compensation with that of 22 comparable companies, including Myogen, Inc., New River Pharmaceuticals Inc., Keryx Biopharmaceuticals, Inc., Idenix Pharmaceuticals, Inc., AtheroGenics, Inc., CV Therapeutics, Inc., Xeno Port, Inc., Renovis, Inc., Santarus, Inc., Dendreon Corporation, Osiris Therapeutics, Inc., Coley Pharmaceutical Group, Inc., Somaxon Pharmaceuticals, Inc., Inspire Pharmaceuticals, Inc., Tercica, Inc., CoTherix, Inc., Barrier Therapeutics, Inc., Insmed Incorporated, Dynavax Technologies Corporation, ISTA Pharmaceuticals, Inc., Acorda Therapeutics, Inc. and DOV Pharmaceutical, Inc., analyzing various factors such as geography, employee headcount, research and development expenses, capitalization, product candidate pipeline, and therapeutic focus. Our Compensation Committee realizes that benchmarking the Company’s compensation against the compensation earned at comparable companies may not always be appropriate, but it believes that engaging in a comparative analysis of the Company’s compensation practices from time to time is useful at this point in the life cycle of the Company. In instances where an executive officer is uniquely critical to our success, or in the event of Company achievements that exceed expectations, the Compensation Committee may provide compensation above the median referred to above. For example, we provided bonuses significantly above target levels to each of our executives for the year ended December 31, 2006, in light of the Company’s successful initial public offering and positive Phase III trial results. Our Compensation Committee also granted additional options to each of our executives in January 2007, and recently approved tax indemnification benefits for certain executives in the event of a change of control (as described in “— Recent developments” and “— Severance and change in control benefits” below, respectively), to provide and preserve significant incentives for these executives to achieve additional Company milestones, including filing a New Drug Application with the United States Food and Drug Administration for its product candidate iloperidone and consummating one or more strategic transactions. We believe that, given the industry in which we operate and the corporate culture we have created, our compensation levels are generally sufficient to retain our existing executive officers and to hire new executive officers when and as required.


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Equity Compensation
 
All option grants made prior to our initial public offering on April 12, 2006 were made at what our Board of Directors determined to be the fair market value of our Common Stock on the respective grant dates. During the fourth quarter of 2005 our Board of Directors retrospectively analyzed these grants for the years ended December 31, 2004 and December 31, 2005. As a result of this retrospective analysis, we determined that the fair value of our Common Stock on a fully-diluted basis steadily increased from $3.21 per share at March 31, 2004 to $17.18 per share at December 31, 2005, even though our options were granted between the range of $0.33 to $4.73 per share on those dates. For more information on this retrospective analysis, please see Item 7 of our annual report on Form 10-K, entitled “Management’s discussion and analysis of financial condition and results of operations.” Since our initial public offering on April 12, 2006, we have made option grants based on the closing market value of our stock as reported on The Nasdaq Stock Market on the date of grant. The value of the shares subject to our 2006 option grants to executive officers is reflected in the “2006 summary compensation table” and “2006 grants of plan-based awards” tables below.
 
We do not have any program, plan or obligation that requires us to grant equity compensation to any executive on specified dates. The authority to make equity grants to executive officers rests with our Compensation Committee, although, as noted above, the Compensation Committee does consider the recommendations of its President and Chief Executive Officer in setting the compensation of our other executives, as well as the recommendations of the other members of our Board of Directors. All of our option grants made prior to our initial public offering, including all grants to executives, were made under our Second Amended and Restated Management Equity Plan. All of our option grants to executives since our initial public offering have been made under our 2006 Equity Incentive Plan. Grants to executives were made in June 2006 (in connection with the hiring of Dr. Paolo Baroldi, our Senior Vice President and Chief Medical Officer), in December 2006 (to Drs. Baroldi, Copmann and Phadke following our compensation review in November 2006, as described above in “— Benchmarking of base compensation and equity holdings”) and in January 2007 (to each of our senior executives, as described above in “— Benchmarking of base compensation and equity holdings).
 
Cash Incentive Bonuses
 
Yearly cash incentive bonuses for our executives are established as part of their respective individual employment agreements. Each of these employment agreements provides that the executive will receive a cash incentive bonus determined in the discretion of our Board of Directors, with a target bonus amount specified for that executive based on individualized objective and subjective criteria. These criteria are established by the Compensation Committee and approved by the full Board of Directors on an annual basis, and include specific objectives relating to the achievement of clinical, regulatory, business and/or financial milestones. The target cash incentive bonus amount for each of our executives for the year ended December 31, 2006 was as follows:
 
  •  Mihael H. Polymeropoulos, M.D., President and Chief Executive Officer: 40% of base salary
 
  •  Paolo Baroldi, M.D., Ph.D., Senior Vice President and Chief Medical Officer: 25% of base salary
 
  •  William D. “Chip” Clark, Senior Vice President and Chief Business Officer: 25% of base salary
 
  •  Steven A. Shallcross, Senior Vice president and Chief Financial Officer: 25% of base salary
 
  •  Thomas Copmann, Ph.D., Vice President of Regulatory Affairs: 28% of base salary
 
  •  Deepak Phadke, Vice President of Manufacturing: 15% of base salary
 
We paid bonuses significantly above these targets in February 2007 for the year ended December 31, 2006 given significant Company achievements, including our successful initial public offering and our positive Phase III trial results for our product candidates iloperidone and VEC-162. However, the target cash incentive bonus amount for each of our executives for the year ended December 31, 2007 remained the same as for the year ended December 31, 2006.
 
Given that the Company has not yet generated revenues, the Compensation Committee has not considered whether the Company would attempt to recover cash incentive bonuses to the extent that they were paid based on our financial performance and one or more measures of our financial performance are subsequently restated in a downward direction.


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Severance and Change in Control Benefits
 
Each of our executives has a provision in his employment agreement providing for certain severance benefits in the event of termination without cause, as well as a provision providing for the acceleration of his then unvested options in the event of termination without cause following a change in control of the Company. These severance and acceleration provisions are described in the “— Employment agreements” section below, and certain estimates of these severance and change of control benefits are provided in “— Estimated payments and benefits upon termination” below.
 
In addition to these severance benefits, our Compensation Committee recently determined that the Company will enter into tax indemnity agreements with Mihael H. Polymeropoulos, M.D., its President and Chief Executive Officer, Paolo Baroldi, M.D., Ph.D., its Senior Vice President and Chief Medical Officer, Chip Clark, its Senior Vice President, Chief Business Officer and Secretary, and Steven A. Shallcross, its Senior Vice President, Chief Financial Officer and Treasurer. Under these tax indemnity agreements, the Company or its successor will reimburse the executive officers for any excise tax that they are required to pay under Section 4999 of the Internal Revenue Code of 1986, as amended, as well as the income and excise taxes imposed on the reimbursement. Section 4999 imposes a 20% excise tax on payments and distributions that are made or accelerated (or the vesting of which is accelerated) as a result of a change in control of the Company. The excise tax applies only if the aggregate value of those payments and distributions equals or exceeds 300% of the executive officer’s average annual compensation from the Company for the last five completed calendar years or, if less, all years of his employment with the Company. If the tax applies, it attaches to the excess of the aggregate value of the payments and distributions over 100% of the executive officer’s average annual compensation. In the Company’s case, the payments and distributions consist of the continuation of salary, incentive bonus and health insurance coverage for varying periods of time and accelerated vesting of stock options to varying degrees. The Compensation Committee approved these tax indemnity agreements to preserve the financial incentives we created by granting stock options to our senior executives, and to continue to provide motivation for these executives to stay with Vanda and act in the best interests of our stockholders at all times.
 
Other Benefits
 
Our executives are eligible to participate in all of our employee benefit plans, such as medical, dental, vision, group life and disability insurance and our 401(k) plan, in each case on the same basis as our other employees. There were no special benefits or perquisites provided to any executive officer in 2006.
 
Recent Developments
 
On January 30, 2007, the Compensation Committee granted options to its executives as set forth in the table below. Each of these options had an exercise price of $30.65, the closing price of the Company’s Common Stock on January 30, 2007. These options were granted to provide significant incentives for these executives to achieve additional Company milestones, including filing a New Drug Application with the United States Food and Drug Administration for its product candidate iloperidone and consummating one or more strategic transactions.
 
         
    Number of shares
    underlying
    January 30, 2007
Name
  option grant
 
Mihael H. Polymeropoulos, M.D. 
    500,000  
President and Chief Executive Officer
       
Paolo Baroldi, M.D., Ph.D. 
    70,000  
Senior Vice President and Chief Medical Officer
       
William D. “Chip” Clark
    250,000  
Senior Vice President, Chief Business Officer and Secretary
       
Steven A. Shallcross
    95,000  
Senior Vice President, Chief Financial Officer and Treasurer
       
Thomas Copmann, Ph.D. 
    5,000  
Vice President of Regulatory Affairs
       
Deepak Phadke, Ph.D. 
    14,000  
Vice President of Manufacturing
       


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Compensation Committee Report2
 
The Compensation Committee has reviewed and discussed the foregoing Compensation Discussion and Analysis with management and, based on such review and discussions, the Compensation Committee has recommended to the Board of Directors that the Compensation Discussion and Analysis be included in this Proxy Statement.
 
Submitted by the following members of the Compensation Committee:
 
Argeris N. Karabelas, M.D. (Chairman)
James B. Tananbaum, M.D., Ph.D.
H. Thomas Watkins
 
2006 Summary Compensation Table
 
The following table sets forth all of the compensation awarded to, earned by, or paid to the Company’s “principal executive officer,” “principal financial officer” and the four other highest paid executive officers (together, our “named executive officers”) for the year ended December 31, 2006:
 
                                                 
                Option
    Non-equity
    All other
       
    Salary
    Bonus
    awards
    incentive plan
    compensation
    Total
 
Name and principal position
  ($)     ($)     ($)     compensation ($)(1)     ($)     ($)  
 
Michael H Polymeropoulos, M.D. 
  $ 375,333     $     $ 2,976,966 (3)   $ 250,000     $ 6,582 (5)   $ 3,609,081  
President and Chief Executive
Officer
                                               
Paolo Baroldi, M.D., Ph.D. 
    122,917       30,000       103,197 (3)     93,750       63,619 (6)     413,482  
Senior Vice President and
Chief Medical Officer(2)
                                               
William D. “Chip” Clark
    235,971             1,493,222 (3)     118,000       3,039 (5)     1,850,232  
Senior Vice President, Chief
Business Officer and Secretary
                                               
Steven A. Shallcross
    250,000             586,619 (3)     93,750       6,600 (5)     935,969  
Senior Vice President, Chief
Financial Officer and
Treasurer
                                               
Thomas Copmann, Ph.D. 
    207,333             135,860 (4)     40,768       6,600 (5)     390,561  
Vice President of Regulatory
Affairs
                                               
Deepak Phadke, Ph.D. 
    176,233       10,000       115,835 (3)     36,465       4,800 (5)     343,333  
Vice President of Manufacturing
                                               
 
 
(1) Reflects amounts paid in February 2007 for cash incentive bonuses earned for the year 2006.
 
(2) Dr. Baroldi joined the Company in July 2006.
 
(3) Amount reflects the compensation cost for the year ended December 31, 2006 of the named executive officer’s options, calculated in accordance with SFAS 123(R) and using a Black-Scholes valuation model. See the consolidated financial statements included in our annual report on Form 10-K for a discussion of assumptions made by the Company in determining the grant date fair value and compensation costs of our equity awards.
 
(4) Amount reflects the aggregate compensation cost for the year ended December 31, 2006 of (i) all of Dr. Copmann’s options and (ii) 5,665 shares of restricted stock which were issued upon the early exercise of an option owned by Dr. Copmann and which vested to Dr. Copmann during the year ended December 31, 2006, in each case calculated in accordance with SFAS 123(R) and using a Black-Scholes valuation model. See the consolidated financial statements included in our annual report on Form 10-K for a discussion of
 
 
2 The material in this report is not “soliciting material,” is not deemed “filed” with the SEC and is not to be incorporated by reference in any filing of Vanda under the Securities Act or the Exchange Act, whether made before or after the date hereof and irrespective of any general incorporation language in any such filing.


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assumptions made by the Company in determining the grant date fair value and compensation costs of our equity awards
 
(5) Includes matching contributions made by the Company to executives’ respective 401(k) plan contributions.
 
(6) Includes $938 in matching contributions made by the Company to Dr. Baroldi’s 401(k) plan contributions, $49,934 in relocation expenses paid by the Company, and $12,747 in tax costs paid by the Company relating to such relocation expenses.
 
2006 Salary and Bonus in Proportion to Total 2006 Compensation
 
The following table sets forth each named executive officer’s base salary and non-incentive cash bonus, as set forth in the above 2006 summary compensation table, as a percentage of his total compensation, as set forth in the above 2006 summary compensation table, for the fiscal year ended December 31, 2006:
 
         
    Percentage of
 
    compensation
 
    represented by base
 
    salary and
 
    non-equity
 
Named executive officer
  incentive bonuses  
 
Michael H Polymeropoulos, M.D.
    10.4 %
President and Chief Executive Officer
       
Paolo Baroldi, M.D., Ph.D.
    37.0 %
Senior Vice President and Chief Medical Officer(1)
       
William D. “Chip” Clark
    12.8 %
Senior Vice President, Chief Business Officer and Secretary
       
Steven A. Shallcross
    26.7 %
Senior Vice President, Chief Financial Officer and Treasurer
       
Thomas Copmann, Ph.D.
    67.0 %
Vice President of Regulatory Affairs
       
Deepak Phadke, Ph.D.
    51.4 %
Vice President of Marketing
       
 
 
(1) Dr. Baroldi joined the Company in July 2006.
 
Employment Agreements
 
We have entered into offer letters or employment agreements with each of Mihael H. Polymeropoulos, M.D., our Chief Executive Officer, Paolo Baroldi, M.D., Ph.D., our Senior Vice President and Chief Medical Officer, William D. “Chip” Clark, our Senior Vice President, Chief Business Officer and Secretary, Steven A. Shallcross, our Senior Vice President, Chief Financial Officer and Treasurer, Thomas Copmann, our Vice President of Regulatory Affairs, and Deepak Phadke, our Vice President of Manufacturing.
 
Mihael Polymeropoulos, M.D.  We entered into an employment agreement in February 2005 with Dr. Polymeropoulos, our President and Chief Executive Officer, which provides for an annual base salary of not less than $362,250 and the possibility of an annual target cash incentive bonus amount equal to 40% of his annual base salary upon achievement of certain performance goals. (Dr. Polymeropoulos’ current base salary is $425,000.) If Dr. Polymeropoulos’ employment is terminated without cause, he becomes permanently disabled, or he terminates his employment for good reason, he will receive the following severance benefits following his employment termination: (a) a cash payment of his monthly base salary for 12 months; (b) payment of his monthly COBRA health insurance premiums; and (c) a bonus in an amount determined as follows: (i) if he is terminated prior to the first anniversary of this agreement, a pro-rata portion of the anticipated first-year target cash incentive bonus will be given to him; (ii) if he is terminated on or following the first anniversary and prior to the third, the amount will equal the greater of the most recent target cash incentive bonus or the average target cash incentive bonuses awarded for the prior years; or (iii) if he is terminated on or following the third anniversary, the amount will be equal to the greater of the most recent target cash incentive bonus or the average target cash incentive bonus awarded for the prior three years. In addition, if, following a change in control, Dr. Polymeropoulos is terminated without cause, or


23


 

he terminates his employment for good reason, he will become vested in 100% of his then unvested shares and options. In addition to the benefits provided in his employment agreement, we expect that the Company will enter into a tax indemnity agreement with Dr. Polymeropoulos that will provide certain benefits to him in the event of a change in control of the Company, as described above in “— Severance and change in control benefits.
 
Paolo Baroldi, M.D., Ph.D.  We entered into an employment agreement in July 2006 with Dr. Baroldi, our Senior Vice President and Chief Medical Officer, which provides for an annual base salary of not less than $250,000 and the possibility of an annual target cash incentive bonus equal to 25% of his annual base salary. (Dr. Baroldi’s current base salary is $280,000.) Additionally, Dr. Baroldi received a one-time bonus of $30,000 and the Company paid $62,681 for relocation expenses and tax costs relating to such relocation expenses. If Dr. Baroldi’s employment is terminated without cause, he becomes permanently disabled, or he terminates his employment for good reason, he will receive the following severance benefits following his employment termination: (a) a cash payment of his monthly base salary for 12 months; (b) payment of his monthly COBRA health insurance premiums; and (c) a bonus in an amount determined as follows: (i) if he is terminated prior to the first anniversary of this agreement, a pro-rata portion of the anticipated first-year target cash incentive bonus will be given to him; (ii) if he is terminated on or following the first anniversary and prior to the third, the amount will equal the greater of the most recent target cash incentive bonus or the average target cash incentive bonuses awarded for the prior years; or (iii) if he is terminated on or following the third anniversary, the amount will be equal to the greater of the most recent target cash incentive bonus or the average target cash incentive bonus awarded for the prior three years. In addition, if, following a change in control, Dr. Baroldi is terminated without cause, or he terminates his employment for good reason, he will become vested in 24 months’ worth of his then unvested shares and options granted prior to January 2007 by the terms of his employment agreement. Dr. Baroldi will also become vested in all of the shares underlying his January 2007 option grant (set forth in “Compensation Discussion and Analysis — Recent Developments”) in the event that, following a change in control, Dr. Baroldi is terminated without cause, or he terminates his employment for good reason. In addition to the benefits provided in his employment agreement, we expect that the Company will enter into a tax indemnity agreement with Dr. Baroldi that will provide certain benefits to him in the event of a change in control of the Company, as described above in “— Severance and change in control benefits.
 
William D. “Chip” Clark.  We entered into an employment agreement in February 2005 with Mr. Clark, our Senior Vice President, Chief Business Officer and Secretary, which provides for an annual base salary of not less than $227,625 and the possibility of an annual target cash incentive bonus equal to 25% of his annual base salary upon achievement of certain performance criteria. (Mr. Clark’s current base salary is $300,000.) If Mr. Clark’s employment is terminated without cause, he becomes permanently disabled, or he terminates his employment for good reason, he will receive the following severance benefits following his employment termination: (a) a cash payment of his monthly base salary for 12 months; (b) payment of his monthly COBRA health insurance premiums; and (c) a bonus in an amount determined as follows: (i) if he is terminated prior to the first anniversary of this agreement, a pro-rata portion of the anticipated first-year target cash incentive bonus will be given to him; (ii) if he is terminated on or following the first anniversary and prior to the third, the amount will equal the greater of the most recent target cash incentive bonus or the average target cash incentive bonuses awarded for the prior years; or (iii) if he is terminated on or following the third anniversary, the amount will be equal to the greater of the most recent target cash incentive bonus or the average target bonus awarded for the prior three years. In addition, if, following a change in control, Mr. Clark is terminated without cause, or he terminates his employment for good reason, he will become vested in 24 months’ worth of his then unvested shares and options granted prior to January, 2007 by the terms of his employment agreement. Mr. Clark will also become vested in all of the shares underlying his January 2007 option grant (set forth in “Compensation Discussion and Analysis — Recent Developments”) in the event that, following a change in control, Mr. Clark is terminated without cause, or he terminates his employment for good reason. In addition to the benefits provided in his employment agreement, we expect that the Company will enter into a tax indemnity agreement with Mr. Clark that will provide certain benefits to him in the event of a change in control of the Company, as described above in “— Severance and change in control benefits.
 
Steven A. Shallcross.  We entered into an employment agreement in October 2005 with Mr. Shallcross, our Senior Vice President, Chief Financial Officer and Treasurer, which provides for an annual base salary of not less than $250,000 and the possibility of an annual target cash incentive bonus equal to 25% of his annual base salary upon achievement of certain performance criteria. (Mr. Shallcross’ current base salary is $280,000.) If


24


 

Mr. Shallcross’ employment is terminated without cause, he becomes permanently disabled, or he terminates his employment for good reason, he will receive the following severance benefits following his employment termination: (a) a cash payment of his monthly base salary for 12 months; (b) payment of his monthly COBRA health insurance premiums; and (c) a bonus in an amount determined as follows: (i) if he is terminated prior to the first anniversary of this agreement, a pro-rata portion of the anticipated first-year target cash incentive bonus will be given to him; (ii) if he is terminated on or following the first anniversary and prior to the third, the amount will equal the greater of the most recent target cash incentive bonus or the average target cash incentive bonuses awarded for the prior years; or (iii) if he is terminated on or following the third anniversary, the amount will be equal to the greater of the most recent target cash incentive bonus or the average target cash incentive bonus awarded for the prior three years. In addition, if, following a change in control, Mr. Shallcross is terminated without cause, or he terminates his employment for good reason, he will become vested in 24 months’ worth of his then unvested shares and options granted prior to January, 2007 by the terms of his employment agreement. Mr. Shallcross will also become vested in all of the shares underlying his January 2007 option grant (set forth in “Compensation Discussion and Analysis — Recent Developments”) in the event that, following a change in control, Mr. Clark is terminated without cause, or he terminates his employment for good reason. In addition to the benefits provided in his employment agreement, we expect that the Company will enter into a tax indemnity agreement with Mr. Shallcross that will provide certain benefits to him in the event of a change in control of the Company, as described above in “— Severance and change in control benefits.
 
Thomas Copmann, Ph.D.  We entered into an employment agreement in May 2005 with Dr. Copmann, our Vice President of Regulatory Affairs, which provides for an annual base salary of not less than $200,000 and the possibility of an annual target cash incentive bonus equal to 28% of his annual base salary upon achievement of certain performance criteria. (Dr. Copmann’s current base salary is $215,218.) If Dr. Copmann’s employment is terminated without cause, he becomes permanently disabled, or he terminates his employment for good reason, he will receive the following severance benefits following his employment termination: (a) a cash payment of his monthly base salary for 6 months; (b) payment of his monthly COBRA health insurance premiums; and (c) a bonus in an amount equal to a pro-rata portion of the annual target cash incentive bonus for the year of his termination. In addition, if, following a change in control, Dr. Copmann is terminated without cause, or he terminates his employment for good reason, he will become vested in 12 months’ worth of his then unvested shares and options (other than shares underlying his January 2007 option grant, which do not contain any provision for accelerated vesting).
 
Deepak Phadke, Ph.D.  We entered into an offer letter in July 2005 with Dr. Phadke, our Vice President of Manufacturing, which provides for a sign-on bonus of $20,000, $10,000 of which was awarded in his first pay period and the remainder of which was awarded on the one year anniversary of his start date. We also entered into an employment agreement in August 2005 with Dr. Phadke, which provides for an annual base salary of not less than $170,000 and the possibility of an annual target bonus equal to 15% of his annual base salary upon achievement of certain performance criteria. (Dr. Phadke’s current base salary is $183,872.) If Dr. Phadke’s employment is terminated without cause, he becomes permanently disabled, or he terminates his employment for good reason, he will receive the following severance benefits following his employment termination: (a) a cash payment of his monthly base salary for 6 months; (b) payment of his monthly COBRA health insurance premiums; and (c) a bonus in an amount equal to a pro-rata portion of the annual target cash incentive bonus for the year of his termination. In addition, if, following a change in control, Dr. Phadke is terminated without cause, or he terminates his employment for good reason, he will become vested in 12 months’ worth of his then unvested shares and options (other than shares underlying his January 2007 option grant, which do not contain any provision for accelerated vesting).


25


 

 
2006 Grants of Plan-Based Awards
 
The following table sets forth each plan-based award granted to the Company’s named executive officers for the year ended December 31, 2006.
 
                                         
          Estimated
                   
          future
    All other
             
          payouts under
    option awards:
             
          non-equity
    number of
    Exercise or
    Grant date
 
          incentive plan
    securities
    base price
    fair value of
 
    Grant
    awards
    underlying
    of option
    stock option
 
Name
  date     target ($)(1)     options     awards ($/Sh)     awards ($)(2)  
 
Michael H. Polymeropoulos, M.D. 
        $ 150,696           $     $  
Paolo Baroldi, M.D., Ph.D. 
          30,735                    
      07/06/06             60,427       8.30       348,368  
      12/31/06             35,000       24.71       595,175  
William D. “Chip” Clark
          59,183                    
Steven A. Shallcross
          62,500                    
Thomas Copmann, Ph.D. 
          58,240                    
Deepak Phadke, Ph.D. 
          26,520                    
 
 
(1) This column sets forth the target amount of each executive’s cash incentive bonus for 2006, as set forth in such executive’s employment agreement. The actual amounts of these cash incentive bonuses were paid in February 2007 and are set forth in the “Non-equity incentive plan compensation” column of the above 2006 summary compensation table.
 
(2) Represents the fair value of each stock option as of the date it was granted, in accordance with SFAS 123(R) and using a Black-Scholes valuation model.
 
Description of Certain Awards Granted in 2006
 
On July 6, 2006, we granted an option to Dr. Paolo Baroldi to purchase a total of 60,427 shares of our Common Stock. The option vests with respect to 15,106 shares on July 6, 2007, provided Dr. Baroldi has remained employed with us through that date. The option then vests with respect to an additional 1,258 shares for each month after July 2007 that Dr. Baroldi remains employed with us.
 
On December 13, 2006, we granted an option to Dr. Baroldi to purchase a total of 35,000 shares of our Common Stock. The option vests with respect to 8,750 shares on December 13, 2007, provided Dr. Baroldi has remained employed with us through that date. The option then vests with respect to an additional 729 shares for each month after December 2007 that Dr. Baroldi remains employed with us.


26


 

 
Outstanding Equity Awards at 2006 Year-End
 
The following table sets forth information regarding each unexercised option held by each of our named executive officers as of December 31, 2006.
 
                                 
    Number of
    Number of
             
    securities
    securities
             
    underlying
    underlying
    Option
       
    unexercised
    unexercised
    exercise
    Option
 
    options (#)
    options (#)
    price
    expiration
 
Name
  exercisable     unexercisable     ($)     date  
 
Michael H. Polymeropoulos, M.D. 
          15,530 (2)   $ 0.33       05/05/13  
      25,070       69,555 (3)     0.33       02/10/15  
      129,255       284,364 (4)     0.33       09/28/15  
      47,593       142,780 (5)     4.73       12/29/15  
Paolo Baroldi, M.D., Ph.D. 
          60,327 (6)     8.30       07/06/16  
            35,000 (7)     24.71       12/13/16  
William D. “Chip” Clark
    17,562       40,106 (8)     0.33       09/01/04  
      22,156       26,185 (9)     0.33       02/10/15  
      64,231       141,310 (10)     0.33       09/28/15  
      9,976       29,931 (11)     4.73       12/29/15  
Steven A. Shallcross
    12,502       60,585 (12)     0.83       11/14/15  
      16,995       50,985 (13)     4.73       12/29/15  
Thomas Copmann, Ph.D. 
    3,172       9,517 (14)     4.73       12/29/15  
            5,000 (15)     25.50       12/18/16  
Deepak Phadke, Ph.D. 
    315       10,071 (16)     0.33       08/15/15  
      3,275       9,825 (17)     4.73       12/29/15  
            20,000 (18)     25.50       12/18/16  
 
 
(1) Does not include a total of 22,660 shares issued to Dr. Copmann upon the exercise of an option held by him. Of these 22,660 shares, 9,913 shares were vested to Dr. Copmann on December 31, 2006, and the remaining 12,747 shares were not yet vested to Dr. Copmann on December 31, 2006. 472 of these remaining shares vest each month after December, 2006, provided that Dr. Copmann remains employed with us.
 
(2) The option vests with respect to 3,105 additional shares each month after December, 2006, provided that Dr. Polymeropoulos remains employed with us.
 
(3) The option vests with respect to 2,675 additional shares each month after December, 2006, provided that Dr. Polymeropoulos remains employed with us.
 
(4) The option vests with respect to 8,617 additional shares each month after December, 2006, provided that Dr. Polymeropoulos remains employed with us.
 
(5) The option vests with respect to 3,966 additional shares each month after December, 2006, provided that Dr. Polymeropoulos remains employed with us.
 
(6) The option vests with respect to 15,106 shares on July 6, 2007 and with respect to 1,256 additional shares for each month after July 2007, provided that Dr. Baroldi remains employed with us.
 
(7) The option vests with respect to 8,750 shares on December 13, 2007 and with respect to 729 additional shares for each month after December 2007, provided that Dr. Baroldi remains employed with us.
 
(8) The option vests with respect to 1,909 additional shares each month after December, 2006, provided that Mr. Clark remains employed with us.
 
(9) The option vests with respect to 1,007 additional shares each month after December, 2006, provided that Mr. Clark remains employed with us.
 
(10) The option vests with respect to 4,282 additional shares each month after December, 2006, provided that Mr. Clark remains employed with us.
 
(11) The option vests with respect to 831 additional shares each month after December, 2006, provided that Mr. Clark remains employed with us.


27


 

 
(12) The option vests with respect to 1,730 additional shares each month after December, 2006, provided that Mr. Shallcross remains employed with us.
 
(13) The option vests with respect to 1,416 additional shares each month after December, 2006, provided that Mr. Shallcross remains employed with us.
 
(14) The option vests with respect to 264 additional shares each month after December, 2006, provided that Dr. Copmann remains employed with us.
 
(15) The option vests with respect to 1,250 shares on December 18, 2007 and with respect to 104 additional shares for each month after December 2007, provided that Dr. Copmann remains employed with us.
 
(16) The option vests with respect to 314 additional shares each month after December, 2006, provided that Dr. Phadke remains employed with us.
 
(17) The option vests with respect to 272 additional shares each month after December, 2006, provided that Dr. Phadke remains employed with us.
 
(18) The option vests with respect to 5,000 shares on December 18, 2007 and with respect to 416 additional shares for each month after December 2007, provided that Dr. Phadke remains employed with us.
 
2006 Option Exercises and Stock Vested
 
The following table shows the number of shares acquired upon exercise of options by each named executive officer during the year ended December 31, 2006 and the number of shares of restricted stock held by each named executive officer that vested during the year ended December 31, 2006.
 
                 
    Number of
       
    shares
    Value realized
 
    acquired on
    on exercise
 
Name
  exercise (#)     ($)  
 
Michael H. Polymeropoulos, M.D. 
    167,237     $ 4,007,783  
Paolo Baroldi, M.D., Ph.D. 
           
William D. “Chip” Clark
    34,000       598,602  
Steven A. Shallcross
    10,000       256,200  
Thomas Copmann, Ph.D. 
           
Deepak Phadke, Ph.D. 
    4,720       116,772  
 
 
(1) Does not include 5,665 shares of restricted stock which were issued to Dr. Copmann upon the early exercise of an option owned by him and which vested during the year ended December 31, 2006.
 
Severance and Change in Control Arrangements
 
See “— Employment agreements” and “— Severance and change in control benefits” above for a description of the severance and change in control arrangements for Drs. Polymeropoulos, Baroldi, Copmann and Phadke and Messrs. Clark and Shallcross. Drs. Polymeropoulos, Baroldi, Copmann and Phadke and Messrs. Clark and Shallcross will only be eligible to receive severance payments if each officer signs a general release of claims.
 
Our Compensation Committee, as plan administrator of our Second Amended and Restated Management Equity Plan and our 2006 Equity Incentive Plan, has the authority to provide for accelerated vesting of the shares of Common Stock subject to outstanding options held by our named executive officers and any other person in connection with certain changes in control of Vanda.
 
In each employment agreement, a change in control is defined as (i) the consummation of a merger or consolidation of the Company with or into another entity, if persons who were not stockholders of the Company immediately prior to such merger or consolidation own immediately after such merger or consolidation 50% or more of the voting power of the outstanding securities of each of (A) the continuing or surviving entity and (B) any direct or indirect parent corporation of such continuing or surviving entity; or (ii) the sale, transfer or other disposition of all or substantially all of the Company’s assets. A transaction shall not constitute a change in control if its sole purpose is to change the state of the Company’s incorporation or to create a holding company that will be


28


 

owned in substantially the same proportions by the persons who held the Company’s securities immediately before such transaction.
 
Estimated Payments and Benefits Upon Termination
 
The amount of compensation and benefits payable to each named executive officer in various termination situations has been estimated in the tables below. Please note that these tables do not include any benefits payable to our executives in connection with the tax indemnity agreements described above in “— Severance and change of control benefits,” since these agreements were not approved as of December 31, 2006 and still have not yet been executed by the Company or any of our executives.
 
Mihael H. Polymeropoulos, M.D.
 
The following table describes the potential payments and benefits upon employment termination for Dr. Polymeropoulos, the Company’s President and Chief Executive Officer, as if his employment terminated as of December 29, 2006, the last business day of 2006.
 
                                         
                            Involuntary
 
                            termination
 
    Voluntary
    Voluntary
                in connection
 
    resignation
    resignation
    Termination
    Termination
    with or
 
Executive benefits and
  not for good
    for good
    by company
    by company
    following change
 
payments upon termination
  reason     reason     not for cause     for cause     in control  
 
Compensation:
                                       
Base salary
  $  —     $ 376,740 (1)   $ 376,740 (1)   $  —     $ 376,740 (1)
Highest target cash incentive bonus
          181,200 (2)     181,200 (2)           181,200 (2)
Stock options unvested and accelerated
                            11,829,202 (3)
Benefits and perquisites:
                                       
Health care
          23,398 (4)     23,398 (4)           23,398 (4)
Accrued vacation pay
          5,161 (5)     5,161 (5)           5,161 (5)
                                         
Total
  $     $ 586,499     $ 586,499     $     $ 12,415,701  
                                         
 
 
(1) Last monthly base salary prior to the termination for a period of 12 months following the date of the termination.
 
(2) Greater of the most recent target cash incentive bonus awarded prior to termination or the average of target cash incentive bonuses awarded for the prior years. Does not reflect $250,000 cash incentive bonus actually paid to Dr. Polymeropoulos in January 2007 for the year ended December 31, 2006.
 
(3) All options held by Dr. Polymeropoulos will become fully vested in the event of an involuntary termination following a change of control.
 
(4) Payment of the COBRA health insurance premiums up to 18 months or until Dr. Polymeropoulos begins employment with another company that offers comparable benefits.
 
(5) Based on 5 vacation days available to Dr. Polymeropoulos at December 31, 2006.


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Paolo Baroldi, M.D., Ph.D.
 
The following table describes the potential payments and benefits upon employment termination for Dr. Baroldi, the Company’s Senior Vice President and Chief Medical Officer, as if his employment terminated as of December 29, 2006, the last business day of 2006.
 
                                         
                            Involuntary
 
                            termination
 
    Voluntary
    Voluntary
                in connection
 
    resignation
    resignation
    Termination
    Termination
    with or
 
Executive benefits and
  not for good
    for good
    by company
    by company
    following change
 
payments upon termination
  reason     reason     not for cause     for cause     in control  
 
Compensation:
                                       
Base salary
  $  —     $ 250,000 (1)   $ 250,000 (1)   $  —     $ 250,000 (1)
Highest target cash incentive bonus
          62,500 (2)     62,500 (2)           62,500 (2)
Stock options unvested and accelerated
                            986,346 (3)
Benefits and perquisites:
                                       
Health care
          23,398 (4)     23,398 (4)           23,398 (4)
Accrued vacation pay
          2,397 (5)     2,397 (5)           2,397 (5)
                                         
Total
  $     $ 338,295     $ 338,295     $     $ 1,324,642  
                                         
 
 
(1) Last monthly base salary prior to the termination for a period of 12 months following the date of the termination.
 
(2) Target cash incentive bonus for 2006. Does not reflect $93,750 cash incentive bonus actually paid to Dr. Baroldi in January 2007 for the year ended December 31, 2006.
 
(3) Acceleration of 24 months’ worth of Dr. Baroldi’s then unvested options will occur in the event of an involuntary termination following a change of control.
 
(4) Payment of the COBRA health insurance premiums up to 18 months or until Dr. Baroldi begins employment with another company that offers comparable benefits.
 
(5) Based on 3.5 vacation days available to Dr. Baroldi at December 31, 2006.


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William D. “Chip” Clark
 
The following table describes the potential payments and benefits upon employment termination for Mr. Clark, the Company’s Senior Vice President, Chief Business Officer and Secretary, as if his employment terminated as of December 29, 2006, the last business day of 2006.
 
                                         
                            Involuntary
 
                            termination
 
    Voluntary
    Voluntary
                in connection
 
    resignation
    resignation
    Termination
    Termination
    with or
 
Executive benefits and
  not for good
    for good
    by company
    by company
    following change
 
payments upon termination
  reason     reason     not for cause     for cause     in control  
 
Compensation:
                                       
Base salary
  $     $ 236,730 (1)   $ 236,730 (1)   $     $ 236,730 (1)
Highest target cash incentive bonus
          62,600 (2)     62,600 (2)           62,600 (2)
Stock options unvested and accelerated
                            4,460,057 (3)
Benefits and perquisites:
                                       
Health care
          23,398 (4)     23,398 (4)           23,398 (4)
Accrued vacation pay
          1,946 (5)     1,946 (5)           1,946 (5)
                                         
Total
  $  —     $ 324,674     $ 324,674     $  —     $ 4,784,731  
                                         
 
 
(1) Last monthly base salary prior to the termination for a period of 12 months following the date of the termination.
 
(2) Greater of the most recent target cash incentive bonus awarded prior to termination or the average of target cash incentive bonuses awarded for the prior years. Does not reflect $118,000 cash incentive bonus paid to Mr. Clark in January 2007 for the year ended December 31, 2006.
 
(3) Acceleration of 24 months’ worth of Mr. Clark’s then unvested options will occur in the event of an involuntary termination following a change of control.
 
(4) Payment of the COBRA health insurance premiums up to 18 months or until Mr. Clark begins employment with another company that offers comparable benefits.
 
(5) Based on 3 vacation days available to Mr. Clark at December 31, 2006.


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Steven A. Shallcross
 
The following table describes the potential payments and benefits upon employment termination for Mr. Shallcross, the Company’s Senior Vice President, Chief Financial Officer and Treasurer, as if his employment terminated as of December 29, 2006, the last business day of 2006.
 
                                         
                            Involuntary
 
                            termination
 
    Voluntary
    Voluntary
                in connection
 
    resignation
    resignation
    Termination
    Termination
    with or
 
Executive benefits and
  not for good
    for good
    by company
    by company
    following change
 
payments upon termination
  reason     reason     not for cause     for cause     in control  
 
Compensation:
                                       
Base salary
  $  —     $ 250,000 (1)   $ 250,000 (1)   $  —     $ 250,000 (1)
Highest target cash incentive bonus
          62,500 (2)     62,500 (2)           62,500 (2)
Stock options unvested and accelerated
                            2,458,756 (3)
Benefits and perquisites:
                                       
Health care
          23,398 (4)     23,398 (4)           23,398 (4)
Accrued vacation pay
          3,425 (5)     3,425 (5)           3,425 (5)
                                         
Total
  $     $ 339,323     $ 339,323     $     $ 2,789,079  
                                         
 
 
(1) Last monthly base salary prior to the termination for a period of 12 months following the date of the termination.
 
(2) Greater of the most recent target cash incentive bonus awarded prior to termination or the average of target cash incentive bonuses awarded for the prior years. Does not reflect $93,750 cash incentive bonus paid to Mr. Shallcross in January 2007 for the year ended December 31, 2006.
 
(3) Acceleration of 24 months’ worth of Mr. Shallcross’ then unvested options will occur in the event of an involuntary termination following a change of control.
 
(4) Payment of the COBRA health insurance premiums up to 18 months or until Mr. Shallcross begins employment with another company that offers comparable benefits.
 
(5) Based on 5 vacation days available to Mr. Shallcross at December 31, 2006.


32


 

Thomas Copmann, Ph.D.
 
The following table describes the potential payments and benefits upon employment termination for Dr. Copmann, the Company’s Vice President of Regulatory Affairs, as if his employment terminated as of December 29, 2006, the last business day of 2006.
 
                                         
                            Involuntary
 
                            termination
 
    Voluntary
    Voluntary
                in connection
 
    resignation
    resignation
    Termination
    Termination
    with or
 
Executive benefits and
  not for good
    for good
    by company
    by company
    following change
 
payments upon termination
  reason     reason     not for cause     for cause     in control  
 
Compensation:
                                       
Base salary
  $  —     $ 104,000 (1)   $ 104,000 (1)   $  —     $ 104,000 (1)
Highest target cash incentive bonus
          58,240 (2)     58,240 (2)           58,240 (2)
Stock options unvested and accelerated
                            200,964 (3)
Benefits and perquisites:
                                       
Health care
          23,398 (4)     23,398 (4)           23,398 (4)
Accrued vacation pay
          2,849 (5)     2,849 (5)           2,849 (5)
                                         
Total
  $     $ 188,487     $ 188,487     $     $ 389,451  
                                         
 
 
(1) Last monthly base salary prior to the termination for a period of 6 months following the date of the termination.
 
(2) 2006 target bonus. Does not reflect $40,768 cash incentive bonus paid to Dr. Copmann in January 2007 for the year ended December 31, 2006.
 
(3) Acceleration of 12 months’ worth of Dr. Copmann’s then unvested options will occur in the event of an involuntary termination following a change of control.
 
(4) Payment of the COBRA health insurance premiums up to 18 months or until Dr. Copmann begins employment with another company that offers comparable benefits.
 
(5) Based on 5 vacation days available to Dr. Copmann at December 31, 2006.


33


 

Deepak Phadke, Ph.D.
 
The following table describes the potential payments and benefits upon employment termination for Dr. Phadke, the Company’s Vice President of Manufacturing, as if his employment terminated as of December 29, 2006, the last business day of 2006.
 
                                         
                            Involuntary
 
                            termination
 
    Voluntary
    Voluntary
                in connection
 
    resignation
    resignation
    Termination
    Termination
    with or
 
Executive benefits and
  not for good
    for good
    by company
    by company
    following change
 
payments upon termination
  reason     reason     not for cause     for cause     in control  
 
Compensation:
                                       
Base salary
  $  —     $ 88,400 (1)   $ 88,400 (1)   $  —     $ 88,400 (1)
Highest target cash incentive bonus
          26,520 (2)     26,520 (2)           26,520 (2)
Stock options unvested and accelerated
                            157,082 (3)
Benefits and perquisites:
                                       
Health care
          23,398 (4)     23,398 (4)           23,398 (4)
Accrued vacation pay
          2,422 (5)     2,422 (5)           2,422 (5)
                                         
Total
  $     $ 140,740     $ 140,740     $     $ 297,822  
                                         
 
 
(1) Last monthly base salary prior to the termination for a period of 6 months following the date of the termination.
 
(2) 2006 target bonus. Does not reflect $36,465 cash incentive bonus paid to Dr. Phadke in January 2007 for the year ended December 31, 2006.
 
(3) Acceleration of 12 months’ worth of Dr. Phadke’s then unvested options will occur in the event of an involuntary termination following a change of control.
 
(4) Payment of the COBRA health insurance premiums up to 18 months or until Dr. Phadke begins employment with another company that offers comparable benefits.
 
(5) Based on 5 vacation days available to Dr. Phadke at December 31, 2006.
 
The value of the option vesting acceleration was calculated for each of the above tables based on the assumption that the change in control and the executive’s employment termination occurred on December 29, 2006. The closing price of the Company’s stock as of December 29, 2006, was $24.65, which was used as the value of the Company’s stock in the change in control. The value of the vesting acceleration was calculated by multiplying the number of unvested option shares subject to vesting acceleration as of December 29, 2006 by the difference between the closing price of the Company’s stock as of December 29, 2006 and the exercise price for such unvested option shares.


34


 

CERTAIN RELATIONSHIPS AND RELATED PARTY TRANSACTIONS
 
2004 Securityholder Agreement
 
We have entered into a 2004 Securityholder Agreement with certain holders of our Common Stock, including significant holders that are affiliates of certain of our directors. Under the Securityholders’ Agreement, these holders have the right to demand the registration of our Common Stock and to participate in other public offerings of our Common Stock.
 
Indemnification agreements
 
We have entered into indemnification agreements with each of our directors and officers. These agreements, among other things, require us to indemnify each director and officer to the fullest extent permitted by Delaware law, including indemnification of expenses such as attorneys’ fees, judgments, fines and settlement amounts incurred by the director or officer in any action or proceeding, including any action or proceeding by or in right of us, arising out of the person’s services as a director or officer.
 
OTHER MATTERS
 
The Board of Directors knows of no other matters that will be presented for consideration at the Annual Meeting. If any other matters are properly brought before the meeting, it is the intention of the persons named in the accompanying proxy to vote on such matters in accordance with their best judgment.
 
By Order of the Board of Directors
 
-s- William D. Clark
 
William D. “Chip” Clark
Senior Vice President, Chief Business
Officer and Secretary
 
April 10, 2007


35


 

PROXY
VANDA PHARMACEUTICALS INC.
This Proxy is solicited on behalf of the Board of Directors
for the Annual Meeting of Stockholders to be held on May 16, 2007
PROXY


     The undersigned appoints Mr. William D. Clark and Mr. Steven A. Shallcross, proxies for the undersigned, to attend the Annual Meeting of Stockholders of Vanda Pharmaceuticals Inc. (the “Company”), to be held on May 16, 2007 at 9:00 a.m local time, at 9605 Medical Center Drive, Rockville, Maryland, and at any adjournments or postponements of the Annual Meeting, and hereby authorizes such person to represent and to vote as specified in this Proxy all the Common Stock of the Company that the undersigned would be entitled to vote if personally present.
     This Proxy, when properly executed, will be voted in accordance with your indicated directions. If no direction is made, the proxy holders will have the authority to vote FOR the election of each of the Directors listed below and FOR the ratification of the independent public accountant as set forth below.
Proposal 1.
     The Board of Directors recommends a vote FOR the Election of Dr. James B. Tananbaum, Mr. David Ramsay and Mr. H. Thomas Watkins as Directors.
By checking the box under “For All Nominees”, you are voting for all nominees listed to the extent possible based on your ownership of the Company’s capital stock.
By checking the box under “For all nominees, except for the following”, you are voting for some of the nominees and specifying (by writing their names on the provided line) for whom you do not want to vote.
By checking the box under “Abstain”, you are abstaining from voting on this proposal.
PLEASE DESIGNATE YOUR VOTE BY CHECKING ONLY ONE OF THE BOXES BELOW.
To elect the following nominees of the Board of Directors to serve until the end of their respective term or until their successors
have been duly elected and qualified:
Dr. James B. Tananbaum, Mr. David Ramsay and Mr. H. Thomas Watkins.
         
    For all nominees, except for the following:    
         
FOR ALL NOMINEES  
 
  ABSTAIN
   
 
   
o   o   o
(CONTINUED ON REVERSE SIDE)

 


 

Proposal 2.
     The Board of Directors recommends a vote FOR the ratification of PricewaterhouseCoopers LLP as the Company’s independent registered public accounting firm.
By checking the box under “For”, you are voting for ratifying PricewaterhouseCoopers LLP as the Company’s independent registered public accounting firm to the extent possible based on your ownership of the Company’s capital stock.
By checking the box under “Against”, you are voting against ratifying PricewaterhouseCoopers LLP as the Company’s independent registered public accounting firm.
By checking the box under “Abstain”, you are abstaining from voting on this proposal.
PLEASE DESIGNATE YOUR VOTE BY CHECKING ONLY ONE OF THE BOXES BELOW.
To ratify the appointment of PricewaterhouseCoopers LLP as the Company’s independent registered public accounting firm for the fiscal year ending
December 31, 2007.
         
FOR   AGAINST   ABSTAIN
o   o   o
In his discretion, the proxy holder is authorized to vote upon such other business as may properly come before the Annual Meeting.
The undersigned acknowledges receipt of the accompanying Notice of Annual Meeting of Stockholders and Proxy Statement.
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
SIGNATURE
STOCKHOLDER
                 
Signature:       Signature (if held jointly):    
 
               
 
               
Name:
      Title:        
                 
 
               
Date:
    ,2007          
                 
Please date and sign exactly as your name(s) is (are) shown on the share certificate(s) to which the Proxy applies.
When shares are held as joint-tenants, both should sign; when signing as an executor, administrator, trustee, guardian, attorney-in-fact or other fiduciary, please give full title as such; when signing as a corporation, please sign in full corporate name by President or other authorized officer; when signing as a partnership, please sign in partnership name by an authorized person.
PLEASE MARK, SIGN AND DATE THIS PROXY AND RETURN IT PROMPTLY IN THE ENCLOSED POSTAGE-PAID ENVELOPE